| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1820891 = | 66 (1.110) | 9 (0.170) | 7/106 | 2.2 | 13.5% | coding (198/1440 nt) | norV | flavorubredoxin oxidoreductase |
| ? | minE | 1820914 = | 57 (1.080) | coding (221/1440 nt) | norV | flavorubredoxin oxidoreductase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCAGTTCGGTCAGCGCCCCAGCGTGGTCCTCTTCTGCATGGTTAATCACGATGTAATCGATATCCGCCAGATCGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1820967‑1820891‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgattACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGACCGAACTGATGGCACAAATTCCCGA > minE/1820914‑1820983 TCAGTTCGGTCAGCGCCCCAGCGTGGTCCTCTTCTGCATGGTTAATCACGATGTAATCGATATCCGCCAGA < 1:1888327/71‑1TCAGTTCGGTCAGCGCCCCAGCGTGGTCCTCTTCTGCATGGTTAATCACGATGTAATCGATATCCGCCAGA < 1:3173533/71‑1 TCGGTCAGCGCCCCAGCGTGGTCCTCTTCTGCATGGTTAATCACGATGTAATCGATATCCGCCAGATCGAT > 1:1079088/1‑71 CGGTCAGCGCCCCAGCGTGGTCCTCTTCTGCATGGTTAATCACGATGTAATCGATATCCGCCAGATCGATT > 1:2176338/1‑71 CGGTCAGCGCCCCAGCGTGGTCCTCTTCTGCATGGTTAATCACGATGTAATCGATATCCGCCAGATCGATT > 1:2191222/1‑71 TAATCGATATCCGCCAGATCGATTTCATCGTGATTAACCATGCAGAAGAGGACCACGCT < 1:2599607/59‑1 ATCGATATCCGCCAGATCGATTACATCGTGATTAACCATGTAGAAGAGGACCACGCTGGGGCG < 1:734587/63‑1 ATCGATATCCGCCAGATCGATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTG < 1:405024/66‑1 ATCGATATCCGCCAGATCGATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCG > 1:1490038/1‑63 TCGATATCCGCCAGATCGATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGAC > 1:2325701/1‑67 TCGATATCCGCCAGATCGATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGAC > 1:3035889/1‑67 CGATATCCGCCAGATCGATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCT > 1:1279775/1‑63 CGATATCCGCCAGATCGATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCT > 1:2475893/1‑63 GATCGATTTCATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGACCGAACTGATGGCACAAA < 1:3010576/71‑1 CGATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGACCGAACTGATGGCACAAATTC > 1:2597425/1‑71 GATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGACCGAACTGATGGCACAAATTCC < 1:2726289/71‑1 GATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGACCGAACTGATGGCACAAATTCC < 1:1615680/71‑1 ATTACATCGTGATTAACCATGCAGAAGAGGACCACGC > 1:834473/1‑37 TTACATCGTGATAAACCATGCAGAAGAGGACCACGCTGGGGCGCTGACCGAACTGATGGCACAAATTCCC > 1:2418579/1‑70 TACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGACCGAACTGATGGCACAAATTCCCGA > 1:455168/1‑71 TCAGTTCGGTCAGCGCCCCAGCGTGGTCCTCTTCTGCATGGTTAATCACGATGTAATCGATATCCGCCAGATCGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1820967‑1820891‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgattACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGACCGAACTGATGGCACAAATTCCCGA > minE/1820914‑1820983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |