New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	2546002 =	33 (0.550)	9 (0.150)	5/120	3.0	21.7%	coding (545/1047 nt)	rfaF	ADP‑heptose:LPS heptosyltransferase II
	?	minE	2546026 =	32 (0.540)					coding (521/1047 nt)	rfaF	ADP‑heptose:LPS heptosyltransferase II
Rejected: Coverage evenness skew score above cutoff.

AGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/2546071‑2546002 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATTGATTACAGGTATATGATTTTTCA  >  minE/2546026‑2546052                                                                                                   AGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATA                            <  1:17093/71‑1 AGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATA                            <  1:387061/71‑1 AGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATA                            <  1:700047/71‑1   TTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATAAT                          <  1:337528/71‑1                         AATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATA                            >  1:156051/1‑47                           TCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATAAT                          <  1:1111057/47‑1                                      TAATCAATTTTCGCTTTCATCAGAACTTCCGATAATTGTTTtt                   >  1:361707/1‑41                                             TTTTCGCTTTCATCAGAACGTCCGATAATTGATTACAGGTATATGATTTTTCA  >  1:2483317/1‑53                                                      TCATCAGAACGTCCGATAATTGATTACAGGTAAATGATTTT     >  1:2913097/1‑41                                                                                                   AGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/2546071‑2546002 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATTGATTACAGGTATATGATTTTTCA  >  minE/2546026‑2546052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.