| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2596527 | 84 (1.410) | 11 (0.210) | 4/106 | 3.0 | 13.8% | coding (71/1290 nt) | arsB | arsenite/antimonite transporter |
| ? | minE | = 2596539 | 63 (1.200) | coding (59/1290 nt) | arsB | arsenite/antimonite transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACCGGAATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2596454‑2596527‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgaAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCC < minE/2596539‑2596470 CACCGGAATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGC > 1:2557392/1‑71 CGGAATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGA > 1:1379974/1‑71 CGGAATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGA < 1:1416554/71‑1 CGGAATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGA < 1:2185464/71‑1 CGGAATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGA < 1:3017578/71‑1 GAATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAG > 1:3072003/1‑65 ATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGG > 1:3058885/1‑71 ATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGG > 1:2850080/1‑71 ATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGG > 1:3019565/1‑71 GACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGGTTTAGGCATCGGCT < 1:2229009/71‑1 GACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGGTTTAGGCATCGGCT < 1:115764/71‑1 GACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGGTTTAGGCATCGGCT < 1:626451/71‑1 GACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGGTTTAGGCATCGGCT < 1:751771/71‑1 CTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGGTTTAGGC < 1:1427120/50‑1 AACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGGTTTAGGCAT > 1:2360597/1‑50 AACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGGTTTAGGCAT > 1:300396/1‑50 AACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGAAAGGTTTAGGCAT > 1:398467/1‑50 AACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGA > 1:276389/1‑37 AACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGA > 1:1743208/1‑37 AACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCG > 1:1219377/1‑36 AGCCGAAAGGTTTAGGCATCGGCTGGAGTGCTACGCTCGGCGCAGTA > 1:2668764/1‑47 AGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTA > 1:1618706/1‑47 GCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTC > 1:1576449/1‑70 CCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTTGCGTTAGTTACGGGCGTGGTCaa > 1:1421490/1‑69 CCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCA > 1:1441338/1‑71 CGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACT < 1:2366915/46‑1 GAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTACATC > 1:1388592/1‑71 AAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCC < 1:1491118/71‑1 AAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCC < 1:669076/71‑1 CACCGGAATATCACCCGGATGGACCACGCCCGTAACTAACGCCAGTACTGCGCCGAGCGTTGCACTCCAGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2596454‑2596527‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgaAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCC < minE/2596539‑2596470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |