| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2598585 = | 66 (1.110) | 4 (0.080) | 4/104 | 3.0 | 5.4% | coding (649/1353 nt) | gor | glutathione oxidoreductase |
| ? | minE | 2598620 = | 83 (1.610) | coding (614/1353 nt) | gor | glutathione oxidoreductase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAAAACGCATCTGTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2598661‑2598585‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgaagCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCACGCCCGCCA > minE/2598620‑2598689 GAAAACGCATCTGTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGG > 1:2002630/1‑71 AAAACGCATCTGTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGT > 1:1091746/1‑71 AAAACGCATCTGTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGT > 1:2907960/1‑71 AAAACGCATCTGTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGT > 1:203125/1‑71 AAACGCATCTGTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTC > 1:89889/1‑71 CGCATCTGTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCG > 1:1422011/1‑69 CGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTG < 1:1009956/51‑1 CGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTG < 1:1332055/51‑1 CGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGT < 1:970314/40‑1 CGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGT < 1:452386/40‑1 CGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGT < 1:2367003/40‑1 CGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGT < 1:1308015/40‑1 GCGCAGCTTCGACGCGATGATTTCCGAAACGCTGG < 1:3018534/35‑1 TCGACCCGATGATTTCCGAAACGCTGGTCGAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGAT < 1:598930/67‑1 GACCCGATGATTTCCGAAACGCTGGTCGAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGC > 1:1131408/1‑67 CGATGATTTCCGAAACGCTGGTCGAAGCTGCGCAGCGGCGCATGTT < 1:2317965/46‑1 ATGATTTCCGAAACGCTGGTCGAAGCTGCGCAGCGGCGCATGTTTA > 1:2111912/1‑46 CGAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCAC > 1:2078737/1‑67 CGAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCAC > 1:913845/1‑67 CGAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCAC > 1:2945556/1‑67 CGAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCA > 1:2057212/1‑66 GAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCACGCCCG > 1:2881417/1‑71 GAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCACGCCC < 1:949199/70‑1 GAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCACGCCC < 1:360906/70‑1 GAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGC > 1:1436055/1‑48 GAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGC > 1:112152/1‑48 GAAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGC > 1:117285/1‑48 AAGCTGCGCAGCGGCGCGTGTTTACGCACAAACAGATGCGTTT < 1:81598/43‑1 AAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCACGCCCGC < 1:1391082/71‑1 AAGCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTT < 1:746370/43‑1 GCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCACGCCCGCCA < 1:3849/71‑1 GCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTC > 1:326241/1‑43 GCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTC > 1:599346/1‑43 GCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTC > 1:758592/1‑43 GCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTC > 1:841580/1‑43 GCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTC > 1:2536213/1‑43 GCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTC > 1:2070094/1‑43 GCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTC > 1:1863176/1‑43 GAAAACGCATCTGTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2598661‑2598585‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgaagCTGCGCAGCGGCGCATGTTTACGCACAAACAGATGCGTTTTCGCGCCGAGGCCGTTAATCACGCCCGCCA > minE/2598620‑2598689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |