| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2616963 = | 134 (2.240) | 9 (0.170) | 5/108 | 2.8 | 7.6% | coding (272/558 nt) | dcrB | periplasmic protein |
| ? | minE | 2616985 = | 100 (1.860) | coding (250/558 nt) | dcrB | periplasmic protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2617038‑2616963‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatgaCTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCTGCGTTCCCAGCTTACCGCTCT > minE/2616985‑2617053 tAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGC < 1:1390211/70‑1GAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGC < 1:1516926/71‑1GAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGC < 1:1061598/71‑1GAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGC < 1:3012643/71‑1GAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGC < 1:2799109/71‑1GAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGC < 1:2113140/71‑1 CCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGC < 1:2361457/62‑1 TGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATG < 1:3097039/53‑1 CCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATG < 1:2023710/45‑1 GACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCG < 1:508890/40‑1 GACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCG < 1:2735845/40‑1 GACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCG < 1:2078210/40‑1 GACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCG < 1:2028615/40‑1 GACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCG < 1:2007197/40‑1 GACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCG < 1:152022/40‑1 GCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATG > 1:2876808/1‑40 GCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATG > 1:727519/1‑40 GCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATG > 1:81082/1‑40 GCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATG > 1:2083656/1‑40 GCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATG > 1:1278349/1‑40 GCCACAGGGCAGAAAGCAGTCATCGTCATCATGGGCGATG > 1:73332/1‑40 TCATCGTCATCATGGGCGATGACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCTG < 1:28611/71‑1 TCATCGTCATCATGGGCGATGACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCTG > 1:435176/1‑71 ATCGTCATCATGGGCGATGACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCTGCG > 1:786804/1‑71 ATCGTCATCATGGGCGATGACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCT < 1:2368907/68‑1 ATCGTCATCATGGGCGATGACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCT < 1:1369063/68‑1 ATCGTCATCATGGGCGATGACTGCTTTCTGCCCGGT < 1:2295983/36‑1 ATCGTCATCATGGGCGATGACTGCTTTCTGCCCGGT < 1:2124134/36‑1 ATCGTCATCATGGGCGATGACTGCTTTCTGCCCGGT < 1:2933471/36‑1 ATCGTCATCATGGGCGATGACTGCTTTCTGCCCGGT < 1:1603732/36‑1 CGATGACTGCTTTCTGCCCGGTGGCGTCGGACCAGA < 1:477294/36‑1 GATGACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCTGCGTTCCCAGCTTACCGC > 1:838971/1‑71 ATGACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCTG < 1:2417660/53‑1 ATGACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGC < 1:688666/39‑1 ATGACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGC < 1:2375751/39‑1 TGACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCTGCGTTCCCAGCTTACCGCTC > 1:2753716/1‑71 GACTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCTGCGTTCCCAGCTTACCGCTCT > 1:1562861/1‑71 GAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2617038‑2616963‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatgaCTGCTTTCTGCCCGGTGGCGTCGGACCAGACATGCATGTTATTGGCCTGCGTTCCCAGCTTACCGCTCT > minE/2616985‑2617053 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |