| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | minE | 1,744,552 | G→A | V483I (GTC→ATC) | nadB → | quinolinate synthase, L‑aspartate oxidase (B protein) subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,744,552 | 0 | G | A | 100.0% | 126.5 / NA | 39 | V483I (GTC→ATC) | nadB | quinolinate synthase, L‑aspartate oxidase (B protein) subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (19/20); total (19/20) | |||||||||||
TGGAACGCGCCCTGCGGCGGATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCGTCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGATTGTTCGCTGTGC > minE/1744484‑1744616 | tGGAACGCGCCCTGCGGCGGATAACCCTGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCAtc > 1:28915/1‑71 (MQ=255) cgcCCTGCGGCGGATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAaata < 1:3069642/71‑1 (MQ=255) cggcggATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGc < 1:606062/70‑1 (MQ=255) cggcggATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGc < 1:2582080/70‑1 (MQ=255) cggcggATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGc < 1:2242435/70‑1 (MQ=255) ggcggATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTg < 1:2383510/71‑1 (MQ=255) ggATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCAtct > 1:146664/1‑54 (MQ=255) ggATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCAtct > 1:2552118/1‑54 (MQ=255) ggATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAg < 1:2009507/71‑1 (MQ=255) aaCCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTg < 1:2016073/70‑1 (MQ=255) ccATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCg > 1:1066023/1‑70 (MQ=255) ccATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCg > 1:498598/1‑70 (MQ=255) cATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCg > 1:954476/1‑69 (MQ=255) cATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGt > 1:779464/1‑70 (MQ=255) cATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTa < 1:1445781/71‑1 (MQ=255) cATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTa < 1:1876162/71‑1 (MQ=255) aTGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTa > 1:470436/1‑70 (MQ=255) cTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATc < 1:636048/70‑1 (MQ=255) acaaGAAATAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTa > 1:3009207/1‑70 (MQ=255) tAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGcc < 1:2236824/71‑1 (MQ=255) tAGACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGcc < 1:322486/71‑1 (MQ=255) gACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGa < 1:943988/71‑1 (MQ=255) gACGAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGa < 1:2839646/71‑1 (MQ=255) gAATATTACGCCCATTTCCGCATCTCAAATAATTTGCt < 1:2528110/38‑1 (MQ=255) gAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACGGGTTGCCGAGtt < 1:1885325/71‑1 (MQ=255) gAATATTACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGtt > 1:1855634/1‑71 (MQ=255) ttACGCCCATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGATTg < 1:23753/71‑1 (MQ=255) tACGCCCATTTCCGCATCTCAAATAATTTGCTGGAg > 1:2828693/1‑36 (MQ=255) tACGCCCATTTCCGCATCTCAAATAATTTGCTGGAg > 1:1897605/1‑36 (MQ=255) tACGCCCATTTCCGCATCTCAAATAATTTGCTGGAg > 1:1735590/1‑36 (MQ=255) tACGCCCATTTCCGCATCTCAAATAATTTGCTGGAg > 1:1662558/1‑36 (MQ=255) tACGCCCATTTCCGCATCTCAAATAATTTGCTGGAg > 1:1459572/1‑36 (MQ=255) cccATTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGATTGTTCGc > 1:172714/1‑71 (MQ=255) aTTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTg > 1:2517552/1‑41 (MQ=255) aTTTCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGa < 1:2513297/60‑1 (MQ=255) tttCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGATTGTTCGCtgt < 1:3192139/70‑1 (MQ=255) tttCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGATTGTTCGCtgt < 1:618706/70‑1 (MQ=255) tCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGATTGTTCGCTGTGc > 1:508526/1‑70 (MQ=255) tCCGCATCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGATTGTTCGCTGTGc > 1:1903792/1‑70 (MQ=255) | TGGAACGCGCCCTGCGGCGGATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCGTCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGATTGTTCGCTGTGC > minE/1744484‑1744616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |