| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | minE | 2,207,332 | A→G | intergenic (‑22/+408) | tldD ← / ← yhdP | predicted peptidase/conserved membrane protein, predicted transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 2,207,332 | 0 | A | G | 100.0% | 121.3 / NA | 34 | intergenic (‑22/+408) | tldD/yhdP | predicted peptidase/conserved membrane protein, predicted transporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (25/9); total (25/9) | |||||||||||
CGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATG > minE/2207268‑2207398 | cGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCAACTCGTTAGTTGCTGCAg > 1:668436/1‑71 (MQ=255) ttCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTa < 1:465518/71‑1 (MQ=255) cTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTagag < 1:390756/67‑1 (MQ=255) gCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGAttt < 1:2936156/69‑1 (MQ=255) ttGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTa < 1:547062/57‑1 (MQ=255) ttGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTAc < 1:1145056/70‑1 (MQ=255) cACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTg < 1:1607201/70‑1 (MQ=255) aCTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTa > 1:2600937/1‑51 (MQ=255) aCTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTa > 1:2001808/1‑51 (MQ=255) aCCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGAtttttt > 1:1698837/1‑58 (MQ=255) aGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAg > 1:2538292/1‑42 (MQ=255) aGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAg > 1:1894497/1‑42 (MQ=255) aGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAg > 1:1244683/1‑42 (MQ=255) aGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAg > 1:1782030/1‑42 (MQ=255) tAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTAc > 1:1006744/1‑53 (MQ=255) tAAGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTAc > 1:1379811/1‑53 (MQ=255) aaGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGt > 1:1203362/1‑70 (MQ=255) aaGACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGt > 1:2504221/1‑70 (MQ=255) gACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGaa > 1:1866829/1‑71 (MQ=255) gACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGaa > 1:1098226/1‑71 (MQ=255) gACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGaa > 1:2486903/1‑71 (MQ=255) gACTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGaa > 1:2490651/1‑71 (MQ=255) aCTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAAc < 1:565998/71‑1 (MQ=255) aCTCATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAAc < 1:1017656/71‑1 (MQ=255) cATCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGcc > 1:1058735/1‑71 (MQ=255) aTCGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGccc > 1:1729044/1‑71 (MQ=255) cGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCt > 1:1098283/1‑70 (MQ=255) cGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTa > 1:1508665/1‑71 (MQ=255) cGTTTTTGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTa > 1:1435416/1‑71 (MQ=255) tttGCTACTCGTTAGTTGCTGCAGTAGAGGATTTTTTACgg > 1:545339/1‑41 (MQ=255) aCTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTAc > 1:3079346/1‑71 (MQ=255) cTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTa < 1:74378/69‑1 (MQ=255) cTCGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACg > 1:2188330/1‑71 (MQ=255) cGTTAGTTGCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGt > 1:132840/1‑71 (MQ=255) agttgCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATg > 1:2008048/1‑71 (MQ=255) | CGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATG > minE/2207268‑2207398 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |