Predicted mutation
evidence seq id position mutation annotation gene description
RA minE 145,530 T→A T233S (ACA→TCA)  sfsA ← predicted DNA‑binding transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE145,5300TA100.0% 126.0 / NA 38T233S (ACA→TCA) sfsApredicted DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (16/22);  total (16/22)

TGAGGAAAAGCGTATTTGCGCACGCGACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTC  >  minE/145463‑145596
                                                                   |                                                                  
tgAGGAAAAGCGTATTTGCGCACGCGACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAAc                                                                 >  1:458908/1‑71 (MQ=255)
tgAGGAAAAGCGTATTTGCGCACGCGACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAAc                                                                 >  1:1584786/1‑71 (MQ=255)
  aGGAAAAGCGTATTTGCGCACGCGACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCg                                                               >  1:2303730/1‑71 (MQ=255)
   ggAAAAGCGTATTTGCGCACGCGACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCgg                                                              >  1:825212/1‑71 (MQ=255)
      aaaGCGTATTTGCGCACGCGACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAg                                                           >  1:2776662/1‑71 (MQ=255)
              tttGCGCACGCGACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAAcc                                                                >  1:1265073/1‑58 (MQ=255)
              tttGCGCACGCGACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGAtttt                                                    >  1:2778387/1‑70 (MQ=255)
                     aCGCGACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGc                                            >  1:361478/1‑71 (MQ=255)
                      cgcgACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGcc                                           <  1:1541726/71‑1 (MQ=255)
                      cgcgACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGcc                                           <  1:1950858/71‑1 (MQ=255)
                        cgACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCAt                                         <  1:890511/71‑1 (MQ=255)
                          aCCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGc                                       <  1:1282928/71‑1 (MQ=255)
                          aCCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGc                                       <  1:783763/71‑1 (MQ=255)
                           ccAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGcc                                      <  1:100331/71‑1 (MQ=255)
                               aaTGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCtt                                    >  1:187365/1‑69 (MQ=255)
                                aTGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTcag                                 <  1:1950146/71‑1 (MQ=255)
                                aTGTAAATTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTcag                                 >  1:1617099/1‑71 (MQ=255)
                                   tAAATTAACCAGTTACTTACTTTACTACAATGAAACCgg                                                              <  1:262412/39‑1 (MQ=255)
                                   tAAATTAACCAGTTACTTACTTTACTACAATGAAACCgg                                                              <  1:352509/39‑1 (MQ=255)
                                    aaaTTAACCAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTcagcag                              >  1:2183118/1‑70 (MQ=255)
                                           ccAGTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTcc                      <  1:794867/71‑1 (MQ=255)
                                              gTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGaaa                           >  1:511992/1‑63 (MQ=255)
                                              gTTACTTACTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGaaa                           >  1:1523623/1‑63 (MQ=255)
                                               ttacttacTTTACTACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCtt                  <  1:481456/71‑1 (MQ=255)
                                                      ctttactACAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGc           <  1:2806117/71‑1 (MQ=255)
                                                        ttactACAATGAAACCGGCAGTGATTTTTTAATAGCCAt                                         <  1:767341/39‑1 (MQ=38)
                                                         tactacAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGcc          <  1:1125664/69‑1 (MQ=255)
                                                         tactacAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCa         <  1:1338961/70‑1 (MQ=255)
                                                          actacAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAAttct                       >  1:1801726/1‑53 (MQ=255)
                                                          actacAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAAttct                       >  1:873277/1‑53 (MQ=255)
                                                            tacAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTcc                      <  1:309140/54‑1 (MQ=255)
                                                              cAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGTCAGAAt     <  1:412153/69‑1 (MQ=255)
                                                              cAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAAttt   <  1:2502644/71‑1 (MQ=255)
                                                              cAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAAt     <  1:304186/69‑1 (MQ=255)
                                                              cAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAAt     <  1:2327107/69‑1 (MQ=255)
                                                              cAATGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAAt     <  1:199281/69‑1 (MQ=255)
                                                               aaTGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTc  >  1:1970617/1‑71 (MQ=255)
                                                                aTGAAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTc                       <  1:1831104/49‑1 (MQ=255)
                                                                   |                                                                  
TGAGGAAAAGCGTATTTGCGCACGCGACCAGAATGTAAATTAACCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTC  >  minE/145463‑145596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: