| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | minE | 291,204 | T→C | I274T (ATC→ACC) | ppiD → | peptidyl‑prolyl cis‑trans isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 291,204 | 0 | T | C | 100.0% | 157.2 / NA | 43 | I274T (ATC→ACC) | ppiD | peptidyl‑prolyl cis‑trans isomerase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (30/13); total (30/13) | |||||||||||
TATCCAGAGCTACTACGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCATCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAGCTGAATAAAGGCGGTGATTTTGCT > minE/291136‑291271 | tatCCAGAGCTACTACGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCAccc < 1:2037357/71‑1 (MQ=255) tCCAGAGCTACTACGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCa < 1:18770/70‑1 (MQ=255) agagCTACTACGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGAc > 1:2631560/1‑70 (MQ=255) gagCTACTACGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGAcc > 1:2056475/1‑70 (MQ=255) gagCTACTACGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCa < 1:3005400/71‑1 (MQ=255) agCTACTACGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCaa < 1:530407/71‑1 (MQ=255) cGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCa > 1:2319618/1‑62 (MQ=255) cGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCa > 1:326628/1‑62 (MQ=255) cGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCa > 1:1983826/1‑62 (MQ=255) cGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTg > 1:1707367/1‑68 (MQ=255) cGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTg > 1:453675/1‑68 (MQ=255) tCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGaa > 1:1798173/1‑61 (MQ=255) cAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGa > 1:3127102/1‑70 (MQ=255) aGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCaaaa > 1:717842/1‑54 (MQ=255) aGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCaaaa > 1:350193/1‑54 (MQ=255) aGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCaaaa > 1:2212478/1‑54 (MQ=255) tCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGaaa > 1:2302344/1‑67 (MQ=255) ttCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCaaa < 1:1599571/45‑1 (MQ=255) ttCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACt > 1:930754/1‑71 (MQ=255) ttCACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACt > 1:383202/1‑71 (MQ=255) cACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAAc > 1:1907839/1‑45 (MQ=255) cACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAAc > 1:661461/1‑45 (MQ=255) cACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAAc > 1:332085/1‑45 (MQ=255) cACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAAc > 1:796530/1‑45 (MQ=255) cACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATg < 1:53535/53‑1 (MQ=255) cACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGa < 1:90358/54‑1 (MQ=255) cACCCAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACtt > 1:1357766/1‑70 (MQ=255) cACCCAGCCGCAGCGTACACGCTACAGCATCACCCAGACCAAAAc > 1:2456500/1‑45 (MQ=255) cccAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTtgat < 1:2396241/71‑1 (MQ=255) cccAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTtgat < 1:1275188/71‑1 (MQ=255) cccAGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTtgat < 1:1259982/71‑1 (MQ=255) aGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAg > 1:2899091/1‑71 (MQ=255) aGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAg > 1:2693115/1‑71 (MQ=255) aGCCGCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAg > 1:1557131/1‑71 (MQ=255) gCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGc < 1:1174994/54‑1 (MQ=255) gCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAGCTg > 1:2053245/1‑70 (MQ=255) gCAGCGTACCCGCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAGCTg > 1:1579894/1‑70 (MQ=255) gCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAg > 1:2678992/1‑42 (MQ=255) gCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAg > 1:1071943/1‑42 (MQ=255) gCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAg > 1:1809829/1‑42 (MQ=255) gCTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAg > 1:1116750/1‑42 (MQ=255) cTACAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAGCTGAATAAAGGCGGTg < 1:1825742/71‑1 (MQ=255) cAGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAGCTGAATAAAGGCGGTGAtt < 1:765683/71‑1 (MQ=255) aGCATCACCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAGCTGAATAAAGGCGGTGAttt < 1:2990992/71‑1 (MQ=255) tcaccCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAGCTGAATAAAGGCGGTGATTTtgct < 1:859039/71‑1 (MQ=255) | TATCCAGAGCTACTACGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCATCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAGCTGAATAAAGGCGGTGATTTTGCT > minE/291136‑291271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |