Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2986410	2986521	112	61 [0]	[0] 61	arcA	DNA‑binding response regulator in two‑component regulatory system with ArcB or CpxA

ACGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACAGAA  >  minE/2986348‑2986409                                                              | aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:700813/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:556258/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:1037433/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:572848/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:58533/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:612277/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:618895/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:630317/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:646106/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:660621/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:665190/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:669109/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:678106/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:68619/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:56936/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:714997/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:716662/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:738690/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:757405/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:774802/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:795122/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:803417/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:836043/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:863887/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:867960/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:893424/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:933864/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:944160/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:363407/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:107108/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:10845/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:144006/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:1446/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:166322/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:22040/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:233756/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:235089/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:264022/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:336431/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:339054/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:545484/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:373396/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:386625/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:535840/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:501512/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:499377/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:47459/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:471327/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:466456/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:440485/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:439685/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:42395/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:382137/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACCCGCTAACagaa  <  1:935684/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGAAGTTCACGCGCTAACagaa  <  1:117821/62‑1 (MQ=255) aCGGCCAGTCAGGAACATCAAAGCAACATTCGCCTGCTCGCGGAGTTCACGCGCTAACagaa  <  1:264039/62‑1 (MQ=255) aCGACCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:387686/62‑1 (MQ=255)  cGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:627374/61‑1 (MQ=255)    gCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:747549/59‑1 (MQ=255)                 aTCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:779331/46‑1 (MQ=255)                   cAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACagaa  <  1:654597/44‑1 (MQ=255)                                                              | ACGGCCAGTCAGGAACATCAACGCAACATTCGCCTGCTCGCGCAGTTCACGCGCTAACAGAA  >  minE/2986348‑2986409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑