Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1442473	1442792	320	46 [0]	[0] 13	rcsD	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

AACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGCACA  >  minE/1442411‑1442472                                                              | aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:694619/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:481077/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:483537/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:532199/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:545349/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:569152/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:571758/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:601271/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:602878/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:637157/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:644446/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:678185/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:464791/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:724173/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:724684/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:743367/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:778122/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:850522/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:85863/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:918027/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:921406/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:950795/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:992328/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:241158/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:102766/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:111191/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:112840/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:142551/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:143284/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:146980/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:15280/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:197431/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:210418/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:227986/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:239811/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:1015923/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:245065/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:267240/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:284328/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:325054/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:357420/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:403301/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:406366/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:411375/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:420592/1‑62 (MQ=255) aaCCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGcaca  >  1:458444/1‑62 (MQ=255)                                                              | AACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGCACA  >  minE/1442411‑1442472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑