Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1445849	1445953	105	83 [0]	[0] 24	rcsC	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN

TTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAA  >  minE/1445788‑1445848                                                             | ttCACGCTGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:336969/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:755675/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:82564/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:823103/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:822244/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:800450/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:797367/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:790586/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:788480/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:774381/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:761451/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:840538/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:748687/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:743932/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:736773/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:725479/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:714569/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:703705/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:691639/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:689785/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:1001624/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:91981/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:999093/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:994391/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:993545/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:986431/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:970259/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:968492/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:96232/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:947844/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:940324/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:829836/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:900309/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:897072/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:878176/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:871053/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:867430/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:861536/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:857139/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:849203/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:68610/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:239079/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:404431/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:101071/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:357962/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:347561/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:314720/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:292965/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:267300/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:26286/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:375402/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:1030218/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:224576/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:222400/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:182948/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:179609/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:175358/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:14442/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:116556/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:539460/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:634560/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:629867/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:649986/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:618878/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:59158/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:408130/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:580950/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:524111/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:521020/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:662748/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:508295/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:489227/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:423595/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:666728/61‑1 (MQ=255) ttCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:418604/61‑1 (MQ=255)  tCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:225916/60‑1 (MQ=255)   cACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:23959/59‑1 (MQ=255)     cgcgGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:737553/57‑1 (MQ=255)            aaaaCTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:317842/50‑1 (MQ=255)                cTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:684445/46‑1 (MQ=255)                      cgGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:667344/40‑1 (MQ=255)                      cgGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:924062/40‑1 (MQ=255)                          tCGATCTTCAACTGTTCCGATTCAATCTTCGAGaaa  <  1:839185/36‑1 (MQ=255)                                                             | TTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAA  >  minE/1445788‑1445848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑