Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1812176	1812265	90	77 [0]	[0] 40	csrA	pleiotropic regulatory protein for carbon source metabolism

ACGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCT  >  minE/1812115‑1812175                                                             | aCGCTGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:122630/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTTGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:655876/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGGCTGGATACGCTGGTAGAtct  <  1:635516/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:629744/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:735169/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:710316/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:700952/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:684354/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:665541/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:656559/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:646516/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:741160/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:613457/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:601086/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:593611/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:585879/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:581823/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:580467/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:576248/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:1005282/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:882846/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:99121/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:990981/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:986979/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:971506/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:960862/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:958734/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:89995/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:89927/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:568907/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:878599/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:862675/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:847760/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:832263/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:822826/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:809390/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:796951/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:777485/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:321882/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:1014217/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:1031483/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:129789/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:131853/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:140500/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:16959/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:210474/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:247392/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:275850/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:284467/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:299549/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:508699/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:331873/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:333119/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:420529/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:50380/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:497433/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:483990/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:449730/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:438415/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:428591/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:406720/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:394909/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:382330/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:362653/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:35975/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:350593/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACACTGGTAGAtct  <  1:1408/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCAGGATACGCTGGTAGAtct  <  1:444382/61‑1 (MQ=255) aCGCGGAAAGATTAGTAACTGGACAGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:273689/61‑1 (MQ=255) aCGCGGAAAGATTACTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:77976/61‑1 (MQ=255)   gcgGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:174812/59‑1 (MQ=255)   gcgGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:122378/59‑1 (MQ=255)        aaGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:690026/54‑1 (MQ=255)         aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:246291/53‑1 (MQ=255)               gTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:342629/47‑1 (MQ=255)                tAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:288910/46‑1 (MQ=255)                 aaCTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGAtct  <  1:846510/45‑1 (MQ=255)                                                             | ACGCGGAAAGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCT  >  minE/1812115‑1812175

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑