Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	165993	166172	180	91 [0]	[0] 25	glnD	uridylyltransferase

TATCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCCA  >  minE/165930‑165992                                                               | tatCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCG‑GGCCAGACGTCca  <  1:50611/62‑1 (MQ=255)  atCGTGTAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:481976/62‑1 (MQ=255)  atCGTGAAACAGCGCGTCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:939474/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGATGTCca  <  1:770376/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:562/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:687832/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:685922/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:678249/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:665823/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:664766/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:632248/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:628546/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:621111/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:595208/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:562224/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:743621/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:559572/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:550167/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:549355/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:543240/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:519523/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:482429/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:474219/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:904865/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:962315/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:95978/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:949636/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:947429/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:937318/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:930761/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:923749/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:919336/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:910470/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:908073/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:741975/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:891534/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:880077/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:875603/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:866748/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:866182/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:851150/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:775788/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:761970/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:481693/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:127754/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:3320/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:111155/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:466789/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:294163/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:268361/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:261692/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:240187/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:231213/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:228182/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:336385/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:223857/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:220327/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:220222/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:212723/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:129606/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:174627/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:155454/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:146866/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:14412/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:350175/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:4505/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:435386/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:434011/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:427100/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:418564/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:418099/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:40476/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:404608/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:403588/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:400781/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:400542/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:397948/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:389584/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:356844/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTAGACGGCAGGCGCGGCCAGACGTCca  <  1:392686/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTCAATTGACGGCAGGCGCGGCCAGACGTCca  <  1:605782/62‑1 (MQ=255)  atCGTGAAACAGCGCGGCGATGAAAATCAGCTAAGTTGACGGCAGGCGAGGCCAGACGTCca  <  1:278175/62‑1 (MQ=255)   tCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:1030686/61‑1 (MQ=255)   tCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:717048/61‑1 (MQ=255)   tCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:100744/61‑1 (MQ=255)   tCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:693956/61‑1 (MQ=255)   tCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:1006785/61‑1 (MQ=255)   tCGGGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:206679/61‑1 (MQ=255)                       gAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:146600/41‑1 (MQ=255)                          aaTCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:396281/38‑1 (MQ=255)                            tCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCca  <  1:223883/36‑1 (MQ=255)                                                               | TATCGTGAAACAGCGCGGCGATGAAAATCAGCTCAGTTGACGGCAGGCGCGGCCAGACGTCCA  >  minE/165930‑165992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑