Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2005720	2006019	300	44 [0]	[0] 166	[hybC]–[hybB]	[hybC],[hybB]

AACGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGT  >  minE/2005666‑2005719                                                      | aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:741159/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:1011984/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:586456/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:589189/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:598907/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:60630/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:646319/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:669437/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:673054/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:674900/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:717592/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:582829/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:756090/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:769064/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:803714/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:814866/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:824464/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:833182/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:835447/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:883775/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:938951/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:992564/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:401003/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:205765/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:224064/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:227826/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:241590/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:255776/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:27127/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:302243/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:339536/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:345371/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:554628/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:409333/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:415958/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:423401/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:466571/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:467789/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:477509/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:480449/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:50228/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:529518/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACAGGt  >  1:60710/1‑54 (MQ=255) aaCGACGCCATTTTCGATTTCACAATCGATGCGTAAATGCCCCTCAATACGGGt  >  1:251442/1‑54 (MQ=255)                                                      | AACGACGCCATTTTCGATTTCGCAATCGATGCGTAAATGCCCCTCAATACGGGT  >  minE/2005666‑2005719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑