Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2241396	2241452	57	83 [0]	[0] 38	yjaH	conserved hypothetical protein

CGCCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAT  >  minE/2241340‑2241395                                                        | cgcCCCTGGCGCAGCACGCCTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:1003919/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGCCTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:634812/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:788197/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:605163/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:786250/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:769822/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:738421/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:732870/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:722260/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:709875/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:700439/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:684152/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:681140/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:678026/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:674755/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:67419/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:6729/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:671446/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:666798/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:62094/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:61246/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:9742/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:880345/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:1003603/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:969459/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:961726/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:949282/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:948997/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:940097/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:936305/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:930744/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:890366/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:837425/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:873064/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:865640/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:857746/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:85609/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:856078/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:850095/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:841698/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:841006/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:839794/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:166816/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:309295/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:307908/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:276762/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:26229/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:261588/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:255167/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:249025/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:219721/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:205616/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:178773/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:355046/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:149081/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:144547/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:138969/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:127923/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:103217/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:1028567/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:1011428/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:1010992/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:1009676/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:455306/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:58173/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:580449/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:563987/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:526342/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:519226/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:490884/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:475829/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:472893/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:467257/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:592511/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:455250/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:449726/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:436636/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:436235/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:411849/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:389279/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:370998/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:359254/1‑56 (MQ=255) cgcCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAt  >  1:356055/1‑56 (MQ=255)                                                        | CGCCCCTGGCGCAGCACGACTCTCCCCTGACGTAAGGCATCGCTAATCTGGCGGAT  >  minE/2241340‑2241395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑