Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2421356	2421372	17	48 [0]	[0] 34	wzxE	O‑antigen translocase

AAGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTA  >  minE/2421294‑2421355                                                              | aaGCTCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:43774/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:79081/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:616730/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:1005444/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:628588/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:629676/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:695602/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:703008/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:713885/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:743553/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:747893/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:771215/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:6232/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:798012/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:837306/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:843025/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:845695/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:862559/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:882607/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:912157/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:920733/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:996508/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:998384/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:358254/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:1019921/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:106594/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:13321/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:167453/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:230717/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:256035/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:305918/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:311810/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:329224/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:614727/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:366575/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:398317/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:407075/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:449913/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:450519/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:487832/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:568100/62‑1 (MQ=255) aaGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCAGTa  <  1:249864/62‑1 (MQ=255)  aGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:767242/61‑1 (MQ=255)  aGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:73212/61‑1 (MQ=255)  aGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:712896/61‑1 (MQ=255)  aGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:597960/61‑1 (MQ=255)    cgcCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:254321/59‑1 (MQ=255)          cTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTa  <  1:866907/53‑1 (MQ=255)                                                              | AAGCGCCCACTTTTAACACATCACCCACTAACTGCCAGGCAAAGAGATCGCGCATAGCGGTA  >  minE/2421294‑2421355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑