Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2422076	2422083	8	60 [0]	[0] 9	wzxE	O‑antigen translocase

CGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGT  >  minE/2422027‑2422075                                                 | cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:811310/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:593766/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:1021360/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:610057/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:617678/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:642731/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:669065/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:722177/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:724628/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:738202/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:750468/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:755264/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:767279/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:77845/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:789202/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:597272/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:831775/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:841566/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:872848/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:893763/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:918674/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:928419/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:942158/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:951080/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:95746/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:9585/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:971223/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:99155/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:996002/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:454381/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:10502/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:111477/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:113466/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:18304/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:191477/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:308993/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:32172/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:359040/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:374285/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:396745/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:399971/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:408594/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:413169/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:435578/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:570152/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:457513/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:457641/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:482049/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:491889/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:499026/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:517231/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:52831/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:537839/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:555817/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:557317/49‑1 (MQ=255) cgcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:564386/49‑1 (MQ=255) cgcAGCCGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:699710/49‑1 (MQ=255)  gcAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:24030/48‑1 (MQ=255)           aGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:619261/39‑1 (MQ=255)            gCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGt  <  1:731010/38‑1 (MQ=255)                                                 | CGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAACCAAGT  >  minE/2422027‑2422075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑