Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2464212	2464226	15	83 [0]	[0] 55	atpI	ATP synthase, membrane‑bound accesory subunit

AGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATG  >  minE/2464157‑2464211                                                       | aGGCCGGGTGGCCTGGACATTCTCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:791296/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:668878/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:76993/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:766793/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:757527/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:756896/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:755591/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:750440/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:721571/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:678675/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:673811/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:801832/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:664547/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:655815/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:654602/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:650803/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:63484/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:628266/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:610443/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:599386/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:1000716/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:952573/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:988169/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:986996/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:982968/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:98294/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:982683/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:973847/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:964250/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:963760/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:955629/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:595606/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:924071/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:915995/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:90450/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:841198/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:837166/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:823605/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:811205/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:811085/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:810665/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:181726/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:30109/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:298852/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:290711/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:281281/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:278610/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:255033/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:207727/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:202442/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:188038/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:303555/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:173052/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:171861/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:165954/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:165186/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:108000/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:104439/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:1027114/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:1020463/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:1016249/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:44487/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:555588/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:542834/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:528252/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:524207/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:520938/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:520393/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:514016/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:50767/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:505352/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:492088/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:325959/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:444555/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:433444/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:400384/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:354167/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:332448/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:327875/55‑1 (MQ=255) aGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:326631/55‑1 (MQ=255)  ggCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:769763/54‑1 (MQ=255)          ggCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:813267/46‑1 (MQ=255)                 aCATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATg  <  1:5586/39‑1 (MQ=255)                                                       | AGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATG  >  minE/2464157‑2464211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑