Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2609331	2610209	879	35 [0]	[0] 48	[nikE]–[nikC]	[nikE],nikD,[nikC]

AGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTC  >  minE/2609269‑2609330                                                              | aGCCGCTGCGCCCCAGCAGGGCTACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:629298/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGCCGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:495768/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGCCGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:65874/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:691256/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:54855/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:577309/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:606313/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:608919/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:612612/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:961685/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:691711/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:778076/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:780179/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:822704/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:896338/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:908635/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:922572/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:13966/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:484722/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:159081/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:16391/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:175491/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:251375/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:253615/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:268347/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:282705/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:353882/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:372851/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:380689/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:387103/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:393912/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:406343/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:431157/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTc  >  1:518030/1‑62 (MQ=255) aGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAAGGTCAGGGAAACGTTATTc  >  1:366243/1‑62 (MQ=255)                                                              | AGCCGCTGCGCCCCAGCAGGGCGACGGTTTCGCCGCTTTTCAGGGTCAGGGAAACGTTATTC  >  minE/2609269‑2609330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑