Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	541664	541786	123	53 [0]	[0] 86	ompX	outer membrane protein

ATGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCG  >  minE/541787‑541838 |                                                    aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCTGAGCCGTATTCGTAGCg  >  1:395632/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCTTATTCGTAGCg  >  1:1038614/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTa     >  1:119165/1‑49 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:66065/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:754204/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:753129/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:748984/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:736227/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:719131/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:69742/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:695706/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:683474/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:669923/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:666860/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:77654/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:620348/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:61526/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:609433/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:605313/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:600190/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:597946/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:592984/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:576578/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:916423/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:997363/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:99594/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:98183/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:959816/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:953370/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:9533/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:930165/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:928942/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:926696/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:921818/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:759811/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:88266/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:8790/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:842333/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:813397/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:809744/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:809288/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:798940/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:792390/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:569398/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:168743/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:57648/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:308149/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:301639/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:249881/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:245648/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:212005/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:206389/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:189247/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:178737/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:171579/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:330888/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:155610/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:148832/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:145068/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:143140/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:140178/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:133655/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:118878/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:1034382/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:1021950/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:461478/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:1008891/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:548492/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:548263/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:524750/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:50709/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:485372/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:471640/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:470676/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:461900/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:34986/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:458337/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:437762/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:426927/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:421200/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:405226/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:389469/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:36602/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:357206/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCg  >  1:355791/1‑52 (MQ=255) aTGGAAAACGTTGCTCTGGACTACTCTTACGAGGAGAGCCGTATTCGTAGCg  >  1:947356/1‑52 (MQ=255) |                                                    ATGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCG  >  minE/541787‑541838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑