Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1446697	1446783	87	15 [0]	[0] 41	rcsC	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN

CAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCC  >  minE/1446784‑1446845 |                                                              cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCTCTTATcc  <  1:149199/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:785017/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:506540/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:523217/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:568796/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:569321/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:5844/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:594881/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:655508/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:679648/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:689333/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:744190/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:45904/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:812522/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:863213/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:887026/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:907916/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:908240/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:947396/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:979749/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:987397/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:315846/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:112439/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:117367/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:134997/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:137873/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:203819/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:243630/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:251551/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:25648/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:279433/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:461662/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:360190/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:400798/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:404281/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:412726/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:423575/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:440228/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:44257/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:445479/62‑1 (MQ=255) cAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATcc  <  1:107732/62‑1 (MQ=255) |                                                              CAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCC  >  minE/1446784‑1446845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑