Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1575235	1575253	19	22 [0]	[0] 74	xapR	DNA‑binding transcriptional activator

TCCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGACGCG  >  minE/1575254‑1575315 |                                                              tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCaa          >  1:379037/1‑54 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:565500/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:623223/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:612677/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:605050/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:602045/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:601795/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:574972/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:573207/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:565876/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:631181/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:508526/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:507163/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:495441/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:4722/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:469095/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:1006588/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:446895/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:812900/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:955997/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:95319/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:931908/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:923283/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:891550/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:87064/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:853653/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:829985/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:463267/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:805471/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:747353/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:74156/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:698922/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:683044/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:677336/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:668662/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:658160/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:212779/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:275577/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:43768/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:24863/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:238165/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:232768/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:228128/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:223184/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:221074/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:274329/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:186748/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:17889/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:168386/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:136768/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:136228/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:1033782/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:1024375/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:1023070/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:285017/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:312318/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:335023/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:344408/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:432588/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:350623/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:355678/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:431979/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:357344/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:430153/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:386327/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:391360/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:387432/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgc   >  1:83339/1‑61 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcgag  >  1:293210/1‑60 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcg    >  1:854192/1‑60 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGAcg    >  1:550716/1‑60 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCAACAGCAATCGAcgcg  >  1:155386/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATCCGAGACAATACATTATTAGCATTCACCAGCAATCGAcgcg  >  1:357062/1‑62 (MQ=255) tcCCCGACCTATTTGTTCAATACGAGCCAATACATTATTAGCATTCACAAGCAATCGAcgcg  >  1:600325/1‑62 (MQ=255) |                                                              TCCCCGACCTATTTGTTCAATCCGAGCCAATACATTATTAGCATTCACCAGCAATCGACGCG  >  minE/1575254‑1575315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑