Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1815559	1815645	87	31 [0]	[0] 49	recX	regulatory protein for RecA

TGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGT  >  minE/1815646‑1815706 |                                                             tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCa                         >  1:955150/1‑38 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTa     >  1:208673/1‑58 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACg   >  1:189095/1‑60 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACg   >  1:545628/1‑60 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACg   >  1:363923/1‑60 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:809467/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:577361/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:595970/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:599899/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:615646/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:637255/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:670327/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:686415/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:702422/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:716659/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:759586/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:804047/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:545773/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:81568/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:847626/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:850743/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:874474/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:896752/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:921054/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:969144/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:98176/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:99093/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:314015/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:133009/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:166463/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:173891/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:1880/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:202433/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:205191/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:231494/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:267468/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:282429/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:287475/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:572670/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:331460/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:382102/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:408930/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:477914/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:483756/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:511771/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:521435/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:524046/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:102158/1‑61 (MQ=255) tGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGt  >  1:553707/1‑61 (MQ=255) |                                                             TGCCGTAGCATCAATCTCTTCTGGGCCATTTTTGCCCATAATCGGTGCCGCGAGTTTACGT  >  minE/1815646‑1815706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑