Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2544205	2544343	139	22 [0]	[1] 37	rfaL	O‑antigen ligase

TTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGAA  >  minE/2544320‑2544404                         |                                                             ttatattataATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACTATAGCAGt                          <  1:652748/61‑1 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATTCTGa   >  1:707808/1‑60 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:794427/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:598726/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:612300/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:623457/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:658578/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:719121/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:726342/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:594204/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:832776/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:840629/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:882327/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:911845/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:924443/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:940003/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:951253/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:965326/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:326779/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:1020011/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:137201/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:154864/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:174577/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:221265/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:234433/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:24041/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:281266/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:316353/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:1016297/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:329877/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:347692/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:373300/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:409952/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:481278/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGaa  >  1:539688/1‑61 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGa   >  1:48326/1‑60 (MQ=255)                         cACGTAAAATTAGTGACAATAAGCAAACAATAGCAGTg                         >  1:715281/1‑38 (MQ=255)                         |                                                             TTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACTATAGCAGTGATATTATATATTTTTATGCTGAA  >  minE/2544320‑2544404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑