Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	239809	239821	13	81 [0]	[1] 57	araJ	predicted transporter

CGACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAC  >  minE/239821‑239882  |                                                             cGACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:14675/62‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:735859/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:57423/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:574596/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:581349/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:602520/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:608461/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:60925/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:616081/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:616980/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:644616/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:70433/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:71628/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:721339/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:729082/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:73394/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:541760/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:755276/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:796162/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:805234/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:825258/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:85060/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:852389/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:86751/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:926323/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:956405/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:964821/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:972745/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:991530/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:316537/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:102459/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:1027589/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:104841/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:112099/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:131827/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:198585/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:212850/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:213159/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:218262/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:219403/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:282539/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:310354/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:313675/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:552160/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:319412/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:322593/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:337433/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:339763/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:359125/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:383919/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:402264/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:415461/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:431105/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:445941/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:495537/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:507349/61‑1 (MQ=255)  gACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAc  <  1:1006121/61‑1 (MQ=255)  |                                                             CGACCATACAGCAGCAACGACGACATCGCAGCAAACGAAAGCAGGGCGGCAGGCAGCGCCAC  >  minE/239821‑239882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑