| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 203951 | NA (NA) | 6 (0.140) | 4/110 | 3.6 | NA | noncoding (1356/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | minE | = 203960 | NA (NA) | noncoding (1365/1542 nt) | rrsH | 16S ribosomal RNA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/203877‑203951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < minE/203960‑203891 CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:1752647/71‑1CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:1693047/71‑1CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:318553/71‑1CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:1606554/71‑1CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC > 1:34459/1‑71CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:1476619/71‑1CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:502513/71‑1CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC > 1:1276736/1‑71 TCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG > 1:668482/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:2239243/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:1455679/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:1323358/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:1296131/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:2101538/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:824449/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG > 1:2027961/1‑70 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC > 1:2090700/1‑69 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:721095/1‑71 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG < 1:1166431/71‑1 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG < 1:102513/71‑1 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG < 1:1332928/71‑1 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:387242/1‑71 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:1179961/69‑1 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:2360660/69‑1 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:974095/69‑1 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:744891/69‑1 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG < 1:1852403/71‑1 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG < 1:2410402/71‑1 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG < 1:1038113/71‑1 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1115251/1‑70 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:179463/1‑70 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:478761/1‑70 AAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG > 1:1275389/1‑70 AAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:1103329/65‑1 TGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:834339/62‑1 CGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1812134/1‑63 TCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGCATTCTGAT > 1:802036/1‑71 TCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGCATTCTGAT > 1:1027859/1‑71 TCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGCATT > 1:1139035/1‑66 TCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG > 1:1655201/1‑59 CCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1689366/1‑54 CGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:245125/1‑53 CGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1624585/1‑53 CGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:352694/1‑53 CGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:415026/1‑52 CGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:697019/50‑1 ATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTtg < 1:1086826/51‑3 ATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG < 1:1501196/51‑1 TTGGTGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT < 1:420976/48‑1 TGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:248753/1‑48 GAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGCATTCTGATCCACGA < 1:1007047/62‑1 GTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGCATTCTGATCCACGATT > 1:986151/1‑62 GTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG > 1:1123125/1‑45 TCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:888912/41‑1 TCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:927035/41‑1 TCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:744432/41‑1 TCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:317867/41‑1 CAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGCATTCTG > 1:160442/1‑47 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC < 1:2221319/71‑1 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:765523/1‑71 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC < 1:1191620/71‑1 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:1336963/1‑71 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC < 1:227437/71‑1 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC < 1:230337/71‑1 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC < 1:1880188/71‑1 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTC > 1:2022860/1‑61 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTC > 1:2112680/1‑61 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCA < 1:1830491/56‑1 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGA < 1:967965/45‑1 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGA < 1:1227668/45‑1 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCAT < 1:175513/42‑1 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACT < 1:1568923/71‑1 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:1019237/1‑70 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:152908/1‑70 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:1434376/1‑70 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:1379549/1‑70 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGG > 1:1631540/1‑43 TGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCA < 1:776725/54‑1 TGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGG > 1:941859/1‑42 GGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC > 1:1196585/1‑71 GCATTGTGATCCAGGATTACTAGCGATTCAGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC < 1:154944/70‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < 1:101023/71‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < 1:82866/71‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < 1:1177545/71‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC > 1:1038482/1‑70 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC > 1:644388/1‑70 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC > 1:1376633/1‑70 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC < 1:1734500/70‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCA < 1:2395746/52‑1 CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/203877‑203951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < minE/203960‑203891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |