| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 233369 = | 51 (1.090) | 6 (0.140) | 5/110 | 3.2 | 10.9% | coding (745/810 nt) | proC | pyrroline‑5‑carboxylate reductase, NAD(P)‑binding |
| ? | minE | 233386 = | 51 (1.190) | coding (728/810 nt) | proC | pyrroline‑5‑carboxylate reductase, NAD(P)‑binding | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGAAAGATATGGTCTGCTCACCGGGAGGCACCACCATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/233440‑233369‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttccAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATCTTTC > minE/233386‑233439 TGAAAGATATGGTCTGCTCACCGGGAGGCACCACCATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTC > 1:1554445/1‑71 TTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTC < 1:1838351/35‑1 TTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTC < 1:2193180/35‑1 GTACTGGAAGAGAAAGGCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATAT < 1:2389533/71‑1 TACTGGAAGAGAAAGGCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATC > 1:1776674/1‑71 TACTGGAAGAGAAAGGCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATC > 1:2036112/1‑71 TGGAAGAGAAAGGCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATA < 1:1654854/66‑1 AGAGAAAGGCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAG > 1:63275/1‑56 GAAAGGCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCA > 1:36759/1‑52 CCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATCTTTC < 1:772386/56‑1 TGAAAGATATGGTCTGCTCACCGGGAGGCACCACCATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/233440‑233369‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttccAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATCTTTC > minE/233386‑233439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |