| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1134998 = | 41 (0.870) | 3 (0.080) | 3/102 | 3.8 | 7.6% | intergenic (+8/‑93) | pfkB/ydiZ | 6‑phosphofructokinase II/hypothetical protein |
| ? | minE | 1135020 = | 38 (0.950) | intergenic (+30/‑71) | pfkB/ydiZ | 6‑phosphofructokinase II/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACATGACTTTTGAGCATAGTCGGAGAAACGCGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCTGGGGGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1135072‑1134998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggggaatCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCATGTGATAACAAAGGGGTGAAC > minE/1135020‑1135089 CACATGACTTTTGAGCATAGTCGGAGAAACGCGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCTGGGG > 1:443223/1‑71 ACATGACTTTTGAGCATAGTCGGAGAAACGCGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCTG < 1:798135/67‑1 TGACTTTTGAGCATAGTCGGAGAAACGCGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCTGGGGGAAT > 1:1456324/1‑71 TGACTTTTGAGCATAGTCGGAGAAACGCGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCTG < 1:282202/64‑1 TGACTTTTGAGCATAGTCGGAGAAACGCGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCTG < 1:79866/64‑1 TTGAGCATAGTCGGAGAAACGCGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCTGG > 1:1601941/1‑59 AAACGCGTTGCCGACAGGTTGGTGATGTTTCCCCCAATGCT < 1:1719782/41‑1 AAACGCGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCT < 1:499564/41‑1 AAACGCGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCT < 1:1913954/41‑1 CGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCTG < 1:192190/37‑1 TCCCCCAATGCTGGGGGAATCATCACCAACCTGTCGGCAAC < 1:432227/41‑1 CCCCCAATGCTGGGGGAATCATCACCAACCTGTCG > 1:931925/1‑35 ATGCTGGGGGAATCATCACCAACCTGTCGGCAACGCGTTT > 1:2171324/1‑40 GGGGGAATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCATGTGATAACAAAG < 1:751142/70‑1 GGGGGAATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCAT > 1:2188412/1‑58 GGGGGAATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCAT > 1:1844035/1‑58 GGGGGAATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCAT > 1:886432/1‑58 GGGGGAATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCAT > 1:1724029/1‑58 GGGGGAATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCAT > 1:710206/1‑58 GGGGGAATCATCACCAACCTGTCGGCAACGCGTTTCTC > 1:1248310/1‑38 GAATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCATGTGATAACAAAGGGGTG < 1:2141928/71‑1 GAATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCATGTGATAACAAAGGGGT > 1:526533/1‑70 GAATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCATGTGATAACAAAGGGGT > 1:2336908/1‑70 AATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCATGTGATAACAAAGGGGTG > 1:1206949/1‑70 ATCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCATGTGATAACAAAGGGGTGAA > 1:2242713/1‑71 TCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCATGT > 1:1810633/1‑53 TCATCACCAACCTGTCGGCAACGCGGTTCTCCGACTATGCTCAAAAGTCATGTGATAACAAAGGGGTGAAC < 1:549841/71‑1 CACATGACTTTTGAGCATAGTCGGAGAAACGCGTTGCCGACAGGTTGGTGATGATTCCCCCAATGCTGGGGGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1135072‑1134998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggggaatCATCACCAACCTGTCGGCAACGCGTTTCTCCGACTATGCTCAAAAGTCATGTGATAACAAAGGGGTGAAC > minE/1135020‑1135089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |