| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 7063 | 59 (0.840) | 30 (0.460) +GATT |
9/92 | NT | 49.0% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | minE | = 1611756 | 9 (0.130) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
ATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/7046‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGAT < minE/1611756‑1611690 |||| tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAAT < 1:1268734/69‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGA < 1:128813/43‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACT < 1:3021313/38‑1 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG > 1:3061555/1‑70 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG > 1:2026446/1‑70 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG > 1:2877287/1‑70 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG > 1:3167882/1‑70 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA > 1:2045076/1‑50 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA > 1:218220/1‑50 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:1453398/1‑45 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:4177794/1‑45 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:2714590/1‑45 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:3181677/1‑43 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAA > 1:3316225/1‑42 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAA > 1:2330903/1‑42 CCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAG < 1:1312654/71‑1 CAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGT > 1:2082132/1‑71 CAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:2874785/62‑1 CAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:2253621/62‑1 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGC < 1:1962871/57‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATGAGTT > 1:2419422/1‑70 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT < 1:4026893/71‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT < 1:39843/71‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT < 1:3478682/71‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT < 1:3471725/71‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT < 1:1449193/71‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTT > 1:3854573/1‑70 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:3421129/60‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGA > 1:729023/1‑42 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGA > 1:1697090/1‑42 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:3278677/1‑57 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:3519299/1‑57 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:2562446/1‑57 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:195231/1‑57 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:300551/1‑57 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCA > 1:752362/1‑56 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA < 1:3437860/60‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG < 1:3105762/71‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG < 1:2582929/71‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:2780898/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG < 1:134216/71‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:3141716/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG > 1:942716/1‑57 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA < 1:451108/58‑1 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:2102842/1‑57 CGATTCTTCCTGAGGAAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:3959616/1‑57 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGAT > 1:3396844/1‑71 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGAT > 1:1352135/1‑71 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGA > 1:2808089/1‑70 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGA > 1:2715466/1‑70 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACAT > 1:1289651/1‑42 ATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGA < 1:1203830/69‑1 ATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGA < 1:4205744/69‑1 |||| ATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/7046‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGAT < minE/1611756‑1611690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |