| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 981368 = | 59 (0.840) | 6 (0.100) | 3/88 | NT | 9.8% | coding (326/533 nt) | ydfQ | predicted lysozyme |
| ? | minE | 981396 = | 58 (0.930) | coding (298/533 nt) | ydfQ | predicted lysozyme | |||||
GGCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCATTTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/981443‑981368‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttgtGGTTCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTG > minE/981396‑981464 GGCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCAT < 1:470050/71‑1GGCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCAT < 1:2721206/71‑1 GCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAATCGGGTATCGCGTCATT < 1:1864683/71‑1 GCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCATT < 1:821123/71‑1 GCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCATTTT < 1:2116512/71‑1 GCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCATTTT < 1:1998480/71‑1 TGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCATTTTGT > 1:1862426/1‑71 TGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCATCATTTTGT > 1:2285195/1‑71 TGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCATCATTTTGT > 1:569221/1‑71 ATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCATT > 1:108534/1‑63 CGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCATTTT < 1:2434323/55‑1 TGACCGAACCACAAAAAGCGGGTATCGCGTCATTTTGT < 1:2660660/38‑1 CACAAAAAGCGGGTATCGCGTCATTTTGTGGTTCGGTCAGTGGT < 1:1548689/44‑1 CACAAAAAGCGGGTATCGCGTCATTTTGTGGTTCGGTCAGTGGT < 1:3166754/44‑1 AAAGCGGGTATCGCGTCATTTTGTGGTTCGGTCAGTGGTACTTTAATATTG < 1:207467/51‑1 AAAGCGGGTATCGCGTCATTTTGTGGTTCGGTCAGTGGTACTTTAATATTG < 1:1433899/51‑1 AAAGCGGGTATCGCGTCATTTTGTGGTTCGGTCAGTGGTACTTTAATATTG < 1:212801/51‑1 AGCGGGTATCGCGTCATTTTGTGGTTCGGTCAGTGGTACTTTAATATTGCG > 1:1653904/1‑51 TTTTGTGGTTCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGC > 1:1221627/1‑71 TTTGTGGTTCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAA > 1:3124124/1‑66 TTTGTGGTTCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAA > 1:4091873/1‑66 TTTGTGGTTCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAA > 1:1847191/1‑66 TTTGTGGTTCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAA > 1:1971314/1‑66 TGTGGTTCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTT > 1:662953/1‑71 TGGTTCGGTCAGTTGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTG < 1:2861843/70‑1 TGGTTCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTG < 1:2840875/70‑1 GGCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCATTTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/981443‑981368‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttgtGGTTCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTG > minE/981396‑981464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |