| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1936471 | 54 (0.760) | 5 (0.080) | 3/92 | NT | 9.6% | coding (904/1734 nt) | recJ | ssDNA exonuclease, 5' ‑‑> 3'‑specific |
| ? | minE | = 1936485 | 44 (0.680) | coding (890/1734 nt) | recJ | ssDNA exonuclease, 5' ‑‑> 3'‑specific | |||||
GCGCATCGAGTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAACCTAAATCGCTGGCGGCG > minE/1936402‑1936541 | gcgcATCGAGTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACg < 1:4188082/71‑1 (MQ=255)gcgcATCGAGTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACg < 1:3057215/71‑1 (MQ=255)gcgcATCGAGTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACg < 1:616276/71‑1 (MQ=255) cgcATCGAGTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACgg < 1:3885637/71‑1 (MQ=255) cgcATCGAGTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACgg < 1:2028342/71‑1 (MQ=255) gAGTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACatat > 1:3829386/1‑71 (MQ=255) aGTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATc > 1:984399/1‑71 (MQ=255) gTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCg > 1:2455406/1‑71 (MQ=255) gTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCg > 1:4102954/1‑71 (MQ=255) ttCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGt > 1:3500234/1‑71 (MQ=255) ttCATTTGCCACCACGCGCGCTTCGACGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGt > 1:178075/1‑71 (MQ=255) cATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTc > 1:1876842/1‑70 (MQ=255) cATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTc < 1:943094/70‑1 (MQ=255) tttGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAg < 1:1838188‑M2/71‑2 (MQ=255) gCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAgtc > 1:3504971‑M2/1‑67 (MQ=255) ccAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAgtcgt > 1:3885559/1‑71 (MQ=255) ccAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAgtcgt > 1:1939873/1‑71 (MQ=255) ccAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAgtcgt > 1:2933599/1‑71 (MQ=255) ccAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAgtcgt > 1:360179/1‑71 (MQ=255) cAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACtggacgatatgtccgtcggt < 1:4395117‑M1/71‑21 (MQ=255) cAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAgtcgtc < 1:935819/71‑1 (MQ=255) cgcgcgCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGgca < 1:382977/71‑1 (MQ=255) gcgcgcTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAgtcgt < 1:3939721/64‑1 (MQ=255) gcgcgcTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGgcag < 1:4060051/71‑1 (MQ=255) gcgcgcTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGgcag < 1:2362189/71‑1 (MQ=255) cgcgcTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAgtcgt < 1:699905/63‑1 (MQ=255) cTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCAtt > 1:1243247/1‑70 (MQ=255) cTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCAtt > 1:1050668/1‑70 (MQ=255) ttCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCAtt > 1:476742/1‑69 (MQ=255) tCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCAtt > 1:3908267/1‑68 (MQ=255) tCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCAtt > 1:4166883/1‑68 (MQ=255) tCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCAtt > 1:3584413/1‑68 (MQ=255) cGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTgaga > 1:92184/1‑71 (MQ=255) cGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTgaga > 1:87008/1‑71 (MQ=255) cGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTgaga > 1:115962/1‑71 (MQ=255) cGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTgaga > 1:1223987/1‑71 (MQ=255) gCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTGCAGTCGTCCGGCAGCATTGAGAc > 1:4252356/1‑71 (MQ=255) cGATGTTGTCGCACAACAACAGCGCCACACCGACtggacgatatg < 1:359352‑M1/45‑12 (MQ=255) cGATGTTGTCGCACAACAACAGCGCCACACCGACtggacgatatg < 1:1719682‑M1/45‑12 (MQ=255) cGATGTTGTCGCACAACAACAGCGCCACACCGACtggacgatatg < 1:4207471‑M1/45‑12 (MQ=255) gATGTTGTCGCACAACAACAGCGCCACACCGACGGACata > 1:4221962/1‑40 (MQ=255) gATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTg > 1:2879357/1‑71 (MQ=255) aTGTTGTCGCACAACAACAGCGCCACACCGACtggacgatatgtc > 1:763010‑M1/1‑32 (MQ=255) ttgtCGCACAACAACAGC‑CCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTga < 1:2217998/60‑1 (MQ=255) gtCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAgt < 1:662803‑M2/43‑3 (MQ=255) gtCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACg > 1:3053486/1‑63 (MQ=255) gtCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACg > 1:464980/1‑63 (MQ=255) gtCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGcccc < 1:1133567/70‑1 (MQ=255) gtCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGccc > 1:759961/1‑69 (MQ=255) gtCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGccc > 1:1064360/1‑69 (MQ=255) gtCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGccc > 1:1086202/1‑69 (MQ=255) cGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAgc > 1:4191236/1‑71 (MQ=255) caacaacaGCGCCACACCGACGGACATATCGTCCa > 1:2428486/1‑35 (MQ=255) caacaacaGCGCCACACCGACGGACATATCGTCCa > 1:2205387/1‑35 (MQ=255) caacaacaGCGCCACACCGACGGACATATCGTCCa > 1:375420/1‑35 (MQ=255) caacaacaGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCAt > 1:3220241/1‑50 (MQ=255) caacaacaGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCaa < 1:4403959/71‑1 (MQ=255) caacaacaGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCaa < 1:1453445/71‑1 (MQ=255) caacaacaGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCaa < 1:151797/71‑1 (MQ=255) caacaGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTTGCCCCAGCGCAAAAc > 1:1269859/1‑71 (MQ=255) acaGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAACCt < 1:2772779/71‑1 (MQ=255) acaGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAACCt < 1:2001318/71‑1 (MQ=255) caGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAACCTa < 1:2920661/71‑1 (MQ=255) caGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAACCTa < 1:133187/71‑1 (MQ=255) gcgcCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAACCTaaa < 1:1996823/71‑1 (MQ=255) gcCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAACCTAAATc < 1:4136287/71‑1 (MQ=255) cacaCCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAAc < 1:3164031/62‑1 (MQ=255) acCGACGGACATATCGTCCAgtcggtgtggcgctgttgttgtgcgacaacatcggcgaagcgcgcgtgctg < 1:4395117‑M2/71‑52 (MQ=255) gACtggacgatatgtccgtcggtgtggcgctgttgttgtgcgacaacatcggcgaagcgcgcgtgctggc > 1:3504971‑M1/1‑3 (MQ=255) aCtggacgatatgtccgtcggtgtggcgctgttgttgtgcgac < 1:662803‑M1/43‑42 (MQ=255) aCGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAACCTAAATCGCTggcggc < 1:3135434/71‑1 (MQ=255) ctggacgatatgtccgtcggtgtggcgctgttgttgtgcgacaacatcggcgaagcgcgcgtgctggcaaa < 1:1838188‑M1/71‑71 (MQ=255) cGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAACCTAAATCGCTggcggc > 1:1466807/1‑70 (MQ=255) | GCGCATCGAGTTCATTTGCCAGCACGCGCGCTTCGCCGATGTTGTCGCACAACAACAGCGCCACACCGACGGACATATCGTCCAGTCGTCCGGCAGCATTGAGACGTGGCCCCAGCGCAAAACCTAAATCGCTGGCGGCG > minE/1936402‑1936541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |