| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2738692 | 54 (0.760) | 7 (0.110) | 3/90 | NT | 13.4% | intergenic (+466/‑63) | tufA/rpsJ | protein chain elongation factor EF‑Tu/30S ribosomal subunit protein S10 |
| ? | minE | = 2738700 | 42 (0.660) | intergenic (+474/‑55) | tufA/rpsJ | protein chain elongation factor EF‑Tu/30S ribosomal subunit protein S10 | |||||
TTAGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAAATAATTGGAGCTCTGGTCTCATGCAG > minE/2738623‑2738760 | ttAGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATc < 1:2897263/71‑1 (MQ=255)ttAGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATc < 1:707171/71‑1 (MQ=255) tAGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTACCATc > 1:2668038/1‑70 (MQ=255) tAGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTACCATc > 1:3096953/1‑70 (MQ=255) aGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCaa > 1:1675646/1‑71 (MQ=255) aGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCaa > 1:2678330/1‑71 (MQ=255) ccGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATc > 1:2132267/1‑71 (MQ=255) ccGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATc > 1:3404910/1‑71 (MQ=255) gAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATtacgatt < 1:3524075‑M1/71‑8 (MQ=255) gAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGt < 1:2871941/71‑1 (MQ=255) ttGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAatg < 1:1917391‑M2/71‑4 (MQ=255) gCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGt < 1:2410218/71‑1 (MQ=255) tACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt > 1:2664929/1‑71 (MQ=255) tACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt > 1:434604/1‑71 (MQ=255) aCCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGt > 1:3141816/1‑61 (MQ=255) ccTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt > 1:2688258/1‑69 (MQ=255) ccTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt < 1:3971845/69‑1 (MQ=255) cTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt < 1:2219674/68‑1 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATtacgattgatggg < 1:2701819‑M1/64‑14 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATtacgattgatggg < 1:4437752‑M1/64‑14 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATtacgattgatggg < 1:1849131‑M1/64‑14 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATtacgattgatggg < 1:2305302‑M1/64‑14 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAatg < 1:4184918‑M2/62‑4 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTc < 1:234239/66‑1 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt < 1:4010607/67‑1 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt < 1:4005489/67‑1 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt < 1:771751/67‑1 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt < 1:2166621/67‑1 (MQ=255) tAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt < 1:2221606/67‑1 (MQ=255) aaCAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGt < 1:4399772/57‑1 (MQ=255) aCAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATtacgattgatgggag > 1:3026284‑M1/1‑49 (MQ=255) aCAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATtacgattgatgggag > 1:1691414‑M1/1‑49 (MQ=255) cAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGt < 1:4363498/71‑1 (MQ=255) cAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGt < 1:3687504/71‑1 (MQ=255) aTGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTga < 1:4431948/64‑1 (MQ=255) aTGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTga < 1:4010027/64‑1 (MQ=255) tGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTc < 1:1665987/60‑1 (MQ=255) gCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAAt > 1:4339537/1‑70 (MQ=255) cTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCa > 1:1370519/1‑71 (MQ=255) tCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCAt > 1:3833173/1‑71 (MQ=255) ccAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCAtt < 1:633932/70‑1 (MQ=255) aaTCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTc < 1:3630531/71‑1 (MQ=255) tCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGt > 1:3153313/1‑71 (MQ=255) ggggAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGtt < 1:2278357/70‑1 (MQ=255) gAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTtata < 1:2657350/71‑1 (MQ=255) gAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTtata < 1:3614767/71‑1 (MQ=255) aGCTACGTAAGAACGGTTACACTCTCCCATCAATCGt < 1:1203534/37‑1 (MQ=255) aGCTACGTAAGAACGGTTACACTCTCCCATCAATCGt < 1:824634/37‑1 (MQ=255) aGCTACGTAAGAACGGTTACACTCTCCCATCAATCGt < 1:1484975/37‑1 (MQ=255) aGCTACGTAAGAACGGTTACACTCTCCCATCAATCGt < 1:1846127/37‑1 (MQ=255) aGCTACGTAAGAACGGTTACACTCTCCCATCAATCGt < 1:2557004/37‑1 (MQ=255) aGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAa < 1:2412057‑M2/39‑2 (MQ=255) aGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAa < 1:1411332‑M2/39‑2 (MQ=255) aGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAa < 1:770124‑M2/39‑2 (MQ=255) aGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTtata > 1:495637/1‑70 (MQ=255) gCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATaa > 1:2864960/1‑70 (MQ=255) cTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCt < 1:3540708/44‑1 (MQ=255) aCGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTga > 1:2689349/1‑44 (MQ=255) aCGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTga > 1:3558174/1‑44 (MQ=255) aCGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTga > 1:3346577/1‑44 (MQ=255) cGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAaat < 1:2346133/69‑1 (MQ=255) gTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAaataat < 1:1057680/71‑1 (MQ=255) gTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAaataat < 1:3098479/71‑1 (MQ=255) gTAAGAACGGGTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAaatatt < 1:665518/71‑3 (MQ=255) tAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAAATAAtt < 1:2308893/71‑1 (MQ=255) aGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAAATAATTgg < 1:3310652/71‑1 (MQ=255) aGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAAATAATTg < 1:759800/70‑1 (MQ=255) aaCGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAAATAAtt < 1:1949443/67‑1 (MQ=255) aaCGGTTACACTATCCGATGAATCGTATTGGGTCTg < 1:203156/36‑1 (MQ=19) gTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATaaa < 1:2681519/57‑1 (MQ=255) acacTCTCCCATCAATCGTAATGGGTCAGAGGAGTAATCATTTTCGTTTATAAaata > 1:3851449/1‑57 (MQ=255) cacTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAAATAATTGGAGCTCTGGtc < 1:1370752/71‑1 (MQ=255) acTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAAATAATTGGAGCTCTGGtct < 1:336177/71‑1 (MQ=255) ctcCCATCAATCGTAatgggagagtgtaaccgttcttacgtagctccccgattgggagcattgt > 1:1691414‑M2/1‑15 (MQ=255) ctcCCATCAATCGTAatgggagagtgtaaccgttcttacgtagctccccgattgggagcattgt > 1:3026284‑M2/1‑15 (MQ=255) tcCCATCAATCGTATTGGGTCTGAGGAGTAATCATTTTCGTTTATAAAATAATTGGAGCTCTGGTCTCa < 1:444178/69‑1 (MQ=255) cccATCAATCGTAatgggagagtgtaaccgttcttacgtagctccccgattgggagcattgtta < 1:2305302‑M2/64‑52 (MQ=255) cccATCAATCGTAatgggagagtgtaaccgttcttacgtagctccccgattgggagcattgtta < 1:1849131‑M2/64‑52 (MQ=255) cccATCAATCGTAatgggagagtgtaaccgttcttacgtagctccccgattgggagcattgtta < 1:2701819‑M2/64‑52 (MQ=255) cccATCAATCGTAatgggagagtgtaaccgttcttacgtagctccccgattgggagcattgtta < 1:4437752‑M2/64‑52 (MQ=255) cccATCAATCGTAATGGGTCTGAGGAGTAATCAtttt > 1:2152929/1‑37 (MQ=255) cccATCAATCGTAATGGGTCTGAGGAGTAATCAtttt > 1:2298906/1‑37 (MQ=255) cccATCAATCGTAATGGGTCTGAGGAGTAATCAtttt > 1:3521954/1‑37 (MQ=255) cATtacgattgatgggagagtgtaaccgttcttacgtagctccccgattgggagcattgttaggtagccaa < 1:1917391‑M1/71‑69 (MQ=255) cATtacgattgatgggagagtgtaaccgttcttacgtagctccccgattgggagcattgtta < 1:4184918‑M1/62‑60 (MQ=255) cATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAaat < 1:1429119/47‑1 (MQ=255) cATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAAATAATTGGAGCTCTGGTCTCATGCAg < 1:771863/71‑1 (MQ=255) aTCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAaata < 1:2605979/47‑1 (MQ=255) aTCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAaata < 1:2817359/47‑1 (MQ=255) ttacgattgatgggagagtgtaaccgttcttacgtagct < 1:1411332‑M1/39‑39 (MQ=255) ttacgattgatgggagagtgtaaccgttcttacgtagct < 1:2412057‑M1/39‑39 (MQ=255) ttacgattgatgggagagtgtaaccgttcttacgtagct < 1:770124‑M1/39‑39 (MQ=255) | TTAGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATCAATCGTAATGGGTCTGAGGAGTAATCATTTTCGTTTATAAAATAATTGGAGCTCTGGTCTCATGCAG > minE/2738623‑2738760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |