| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1230703 | 34 (0.480) | 3 (0.050) | 3/94 | NT | 8.2% | coding (2053/2061 nt) | ptrB | protease II |
| ? | minE | = 1230732 | 35 (0.530) | coding (2024/2061 nt) | ptrB | protease II | |||||
ACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTAC > minE/1230637‑1230773 | aCCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGc > 1:2854150/1‑71 (MQ=255) cTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGt < 1:1726437/71‑1 (MQ=255) aGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCggg < 1:3298168/71‑1 (MQ=255) gCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGt < 1:307517/71‑1 (MQ=255) gCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGt < 1:2618003/71‑1 (MQ=255) aTGAGCCCGGAGCTGCGTTTAACACTGAAACATTTTCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTaa > 1:3006476/1‑71 (MQ=255) gCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGtt < 1:1827253/71‑1 (MQ=255) ggAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGt > 1:2757302/1‑66 (MQ=255) cGTTTAACACTGAAACATTATCTTGAAAATACTTAGTCCGCtggcgcagggaacattacccgctacgcctg < 1:3340398‑M1/71‑31 (MQ=255) cGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAg < 1:2747962‑M2/71‑2 (MQ=255) tttAACACTGAAACATTATCTGGAAAATACTTAGTCCGCtggcgcagggaacattacccgctacgcct < 1:2535684‑M1/68‑30 (MQ=255) tttAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAgc > 1:4222470‑M2/1‑68 (MQ=255) tAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAgcgc > 1:4099979/1‑70 (MQ=255) cacTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGAcc < 1:2263726/71‑1 (MQ=255) cacTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGAcc < 1:2668506/71‑1 (MQ=255) cacTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGAc > 1:1676036/1‑70 (MQ=255) cTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTg > 1:3938395/1‑56 (MQ=255) tGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCg < 1:3490448/41‑1 (MQ=255) aaaCATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCggg > 1:2867276/1‑41 (MQ=255) aaaCATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGaa > 1:1202369/1‑70 (MQ=255) aaCATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGaa > 1:3925325/1‑69 (MQ=255) cATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGaaaa > 1:1993670/1‑69 (MQ=255) aTTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCa < 1:379235/71‑1 (MQ=255) ttATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTgcgc < 1:4049853/51‑1 (MQ=255) tATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCata > 1:285873/1‑71 (MQ=255) tATCTGGAAAATACTTAGTCCGCAGCCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCata > 1:1283477/1‑71 (MQ=255) aTCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCatat > 1:2488653/1‑71 (MQ=255) aTCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCatat > 1:3377768/1‑71 (MQ=255) aTCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCatat > 1:3538785/1‑71 (MQ=255) cTGGTAAATACTTAGTCCGCAGGCGTAGCGGGTAATGtt > 1:3893401/1‑39 (MQ=255) cTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGtt > 1:1465065/1‑39 (MQ=255) tGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAgcgc < 1:1222538/52‑1 (MQ=255) tGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAg < 1:1921143/63‑1 (MQ=255) tGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAg < 1:4405673/63‑1 (MQ=255) ggAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGATc > 1:2632617/1‑38 (MQ=255) gAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGa > 1:3757798/1‑52 (MQ=255) gAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTcc < 1:3897916/69‑1 (MQ=255) aTACTTAGTCCGCtggcgcagggaacattacccgctacgcct > 1:4249066‑M1/1‑13 (MQ=255) gTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCt > 1:1601917/1‑70 (MQ=255) gTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCt < 1:725212/70‑1 (MQ=255) gCtggcgcagggaacattacccgctacgcctgcggactaagtattttccagataatgtttcagtgttaaa > 1:4222470‑M1/1‑2 (MQ=255) ctggcgcagggaacattacccgctacgcctgcggactaagtattttccagataatgtttcagtgttaaacg < 1:2747962‑M1/71‑71 (MQ=255) cAGGCGTAGCGGGTAATGTTCCCTGCGCCAgcggactaagtattttcaagataatgtttcagtgttaaacg < 1:3340398‑M2/71‑42 (MQ=255) | ACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTAC > minE/1230637‑1230773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |