| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 203909 | NA (NA) | 5 (0.060) | 3/84 | NT | NA | noncoding (1314/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | minE | = 203917 | NA (NA) | noncoding (1322/1542 nt) | rrsH | 16S ribosomal RNA | |||||
Only 100 of 202 total aligned reads displayed.
AATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/203833‑203909‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggagtcGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT < minE/203917‑203849 AATGGCGCATACAAAGAGAAGCGCCCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT > 1:3702185/1‑71 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCGGGATTG < 1:893801/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTt < 1:347914/71‑2 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:5135039/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:5368972/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:2192711/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:3257918/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:1821869/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:1664079/71‑1 TGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:5207288/1‑70 GCGCATACAAAGAGAAGCGACCTCGCGAGAGCACGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG > 1:3810033/1‑71 GCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG > 1:1803272/1‑71 GCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG < 1:6698507/71‑1 CGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:1892376/1‑71 CGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG < 1:1685680/70‑1 CGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG < 1:3086550/70‑1 CGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG < 1:4185776/70‑1 GCATACAAAGAGAAGCGACCTCGCTAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:1499897/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGTATTGGAGTC < 1:1814347/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:4011863/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:4193284/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC > 1:4586172/1‑71 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:495492/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:2470921/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:2353734/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:6346663/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:5003677/66‑1 CATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:3197881/70‑1 CATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCAGATTGGA < 1:2406814/67‑1 CAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:624042/1‑65 CAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:3098262/1‑65 CAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA > 1:2046028/1‑63 AAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT < 1:4166802/64‑1 AGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:1017132/1‑62 AGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:2551300/1‑62 AGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:6546135/1‑62 GAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:352945/1‑61 GAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG < 1:1555419/58‑1 GAAGCGACCTCGC‑AGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG < 1:3265073/57‑1 AAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG < 1:1140468/57‑1 AAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG < 1:95032/57‑1 AAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG < 1:5026055/57‑1 AGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC > 1:662663/1‑58 GCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC > 1:5860095/1‑57 GACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCGAGTTGCAGACTCCAA < 1:5981546/71‑1 GACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:436160/50‑1 ACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA < 1:3789485/51‑1 ACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:2803333/49‑1 ACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:2657231/49‑1 ACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:4561514/49‑1 ACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:2614446/49‑1 CGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT > 1:1218784/1‑44 CGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGG < 1:6878009/44‑1 CGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGG < 1:852803/44‑1 CGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGG < 1:471477/44‑1 CGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGG < 1:4739885/44‑1 CGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGG < 1:479543/44‑1 GAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA < 1:5443291/44‑1 GAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:6581603/40‑1 GAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:1284487/40‑1 GAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:5122020/40‑1 CGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:4603911/38‑1 TAAAGTGCGTCGTAGTCCGGATTGGAGTCGAGTTGCAGACT > 1:4511421/1‑41 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCG > 1:2525562/1‑71 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTAT < 1:556189/45‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACT < 1:4835985/41‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACT < 1:960786/41‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACT < 1:1370686/41‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACT < 1:6272475/41‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACT < 1:2071288/41‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACT < 1:582267/41‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACT < 1:4905658/41‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACT < 1:2820761/41‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACG < 1:1245859/37‑1 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC > 1:3753643/1‑71 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC > 1:3994099/1‑71 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCA > 1:2225962/1‑38 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT < 1:5636123/71‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT > 1:744448/1‑71 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT < 1:6184978/71‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT > 1:5076052/1‑71 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC < 1:340919/70‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC < 1:192785/70‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC < 1:5604856/70‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCG > 1:2968442/1‑69 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCG > 1:5531818/1‑69 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGT > 1:6149627/1‑67 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTC > 1:3601734/1‑60 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCT > 1:2745083/1‑57 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTT > 1:3973044/1‑41 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTT > 1:842468/1‑71 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT > 1:4817480/1‑70 GTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTC > 1:6958014/1‑71 GTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTC < 1:4214299/71‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT > 1:4120958/1‑71 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT > 1:2831538/1‑71 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT < 1:5429684/71‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGC > 1:6092686/1‑49 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCC < 1:3568470/47‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGG < 1:4025443/44‑1 AATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/203833‑203909‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggagtcGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT < minE/203917‑203849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |