| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 566067 = | 141 (1.330) | 12 (0.130) | 3/86 | NT | 10.2% | coding (1682/1719 nt) | poxB | pyruvate dehydrogenase (pyruvate oxidase), thiamin‑dependent, FAD‑binding |
| ? | minE | 566089 = | 87 (0.940) | coding (1660/1719 nt) | poxB | pyruvate dehydrogenase (pyruvate oxidase), thiamin‑dependent, FAD‑binding | |||||
GCAGATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/566141‑566067‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgaTTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGTTTGATCTGCGGTGGAATGGCTAAC > minE/566089‑566156 GCAGATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTG < 1:3439717/71‑1GCAGATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTG < 1:2583237/71‑1GCAGATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGT > 1:1843689/1‑70 CAGATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGA < 1:4996992/71‑1 ATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATG > 1:1550713/1‑70 ATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATG > 1:3552656/1‑70 ATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATG > 1:2516438/1‑70 TCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATG > 1:6730869/1‑69 TCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATG > 1:5415732/1‑69 TCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATG > 1:5075399/1‑69 TCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATG > 1:6567977/1‑69 TCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATG > 1:1749011/1‑69 TCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATG > 1:3144461/1‑69 TCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATG > 1:6867736/1‑69 CCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATGA < 1:6841902/42‑1 CCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATGA < 1:4338595/42‑1 CCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATGA < 1:4514772/42‑1 CCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATGA < 1:1890533/42‑1 CTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATGA > 1:5135020/1‑41 TCATCAGCGGACGCGGTGATGATTGCGCGCAGCATTTACAGGCTGAAAC < 1:2663924/49‑1 TCATCAGCGGACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAAC < 1:3044212/49‑1 TCATCAGCGGACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAAC < 1:910574/49‑1 TCATCAGCGGACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAAC < 1:363359/49‑1 TCATCAGCGGACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAAC < 1:3747788/49‑1 TCATCAGCGGACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAAC < 1:5852206/49‑1 ATCAGCGGACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAACCT > 1:5492342/1‑49 ATCAGCGGACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAACCT > 1:5839111/1‑49 GACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGTTTGATCTGCGGTGG < 1:4313852/71‑1 GACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGTTTGATCTGCGGTGG < 1:6670971/71‑1 GACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGTTTGATCTGCGGTGG < 1:2120434/71‑1 GACGCGGTGATGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGTTTGATCTGCGGTGG < 1:208677/71‑1 TGATGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGT < 1:6077226/50‑1 TGATGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGT < 1:1862512/50‑1 TGATGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTC < 1:737636/46‑1 GATGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGTTTGATCTGCGGTGGAATG < 1:391413/67‑1 GATGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCT > 1:5225549/1‑41 ATGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCC > 1:1743442/1‑39 TGATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGTTTGATCTGCGGTGGAATGGCTAAC < 1:1177458/71‑1 GATTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGTTTGATCTGCGGTGGAATGGCTAAC > 1:94774/1‑70 GCAGATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/566141‑566067‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgaTTGCGCGCAGCATATACAGGCTGAAACCTTTGGCCTGTTCGAGTTTGATCTGCGGTGGAATGGCTAAC > minE/566089‑566156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |