New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 1505658 | 113 (1.060) | 5 (0.050) | 3/92 | NT | 4.3% | coding (1681/1833 nt) | yfbS | predicted transporter |
? | minE | = 1505668 | 116 (1.160) | coding (1671/1833 nt) | yfbS | predicted transporter | |||||
Rejected: Frequency below/above cutoff threshold. |
AGTCACTGAAGCTGTAATTTCCCGGACCTAAAACCAGTGTGTTAACAGGTGAAGAAACCGGTGTCATAAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1505586‑1505658 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcAGCATCCGCCGCCTTTATGACACCGGTTTCTTCACCTGTTAACACACTGGTTTTAGGTCCGGGAAATTA < minE/1505668‑1505600 AGTCACTGAAGCTGTAATTTCCCGGACCTAAAACCAGTGTGTTAACAGGTGAAGAAACCGGTGTCATAAAG < 1:5894059/71‑1 TTTCCCGGACTTAAAACCAGTGTGTTAACAGGTGAAGAAACCGGTGTCATAAAGGCAGCATCCGCCGCCTT < 1:1731592/71‑1 CCTAAAACCAGTGTGTTAACAGGTGAAGAAACCGGTGTCATAAAGG > 1:4464786/1‑46 TGTGTTAACAGGTGAAGAAACCGGTGTCATAAAGGCAGCATCCGCCGCCTTTA < 1:2339409/53‑1 TGTGTTAACAGGTGAAGAAACCGGTGTCATAAAGGCAGCATCCGCCGCCTTTA < 1:3304392/53‑1 TGTTAACAGGTGAAGAAACCGGTGTCATAAAGGCAGCATCCGCCGCCTTTATG > 1:4482231/1‑53 TGTTAACAGGTGAAGAAACCGGTGTCATAAAGGCAGCATCCGCCGCCTTTATG > 1:6879904/1‑53 GGCAGCATCCGCCGCCTTTATGACACCGGTTTCTTCACCTGTTAACACA > 1:529212/1‑49 GCAGCATCCGCCGCCTTTATGACACCGGTTTCTTCACCTGTTAACACACTGGTTTTAGGTCCGGGAAATTA > 1:4227418/1‑71 CAGCATCCGCCGCCTTTATGACACCGGTTTCTTCACCTGTTAACACACTGGTTTTAGGTCCGGGAAATTA > 1:3571854/1‑70 AGTCACTGAAGCTGTAATTTCCCGGACCTAAAACCAGTGTGTTAACAGGTGAAGAAACCGGTGTCATAAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1505586‑1505658 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcAGCATCCGCCGCCTTTATGACACCGGTTTCTTCACCTGTTAACACACTGGTTTTAGGTCCGGGAAATTA < minE/1505668‑1505600 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |