| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1547512 = | 139 (1.310) | 5 (0.050) | 3/90 | NT | 3.8% | coding (961/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter |
| ? | minE | 1547550 = | 126 (1.290) | coding (999/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTTTCTGGAACAGCGTGTCGCCACTGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1547585‑1547512‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTTG > minE/1547550‑1547619 TGTTTCTGGAACAGCGTGTCGCCACTGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTA < 1:4238590/71‑1TGTTTCTGGAACAGCGTGTCGCCACTGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTA < 1:3414284/71‑1 TTTCTGGAACAGCGTGTCGCCACTGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAA < 1:6942921/70‑1 TTTCTGGAACAGCGTGTCGCCACTGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAA < 1:6877129/70‑1 TTTCTGGAACAGCGTGTCGCCACTGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAA < 1:5612933/70‑1 TTTCTGGAACAGCGTGTCGCCACTGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAA < 1:297682/70‑1 TTCTGGAACAGCGTGTCGCCACTGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAAGC > 1:5360328/1‑71 TTCTGGAACAGCGTGTCGCCACTGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAAGC > 1:469933/1‑71 TGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTA > 1:4822719/1‑46 TGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTA > 1:2020894/1‑46 CGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAG > 1:4049925/1‑70 CGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAAGCGACCTCAACCAGTGGCGACACGCT > 1:3722488/1‑63 TTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAAG < 1:74780/35‑1 TTCAGCTGCTGGAACTGACTCCAGCTGGTGTAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACA > 1:2138305/1‑71 TTCAGCTGCTGGAACTGACTCCAGCTGGTGTAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACA > 1:4122377/1‑71 AACTGACTCCAGCTGGTGTAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAA < 1:2631713/71‑1 AAGGGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCG > 1:4540794/1‑71 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCGTCGC < 1:1816304/70‑1 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCG < 1:3318979/71‑1 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCG < 1:4344109/71‑1 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCG < 1:3631984/71‑1 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCG < 1:3443513/71‑1 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCAT > 1:1069070/1‑67 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCAT > 1:738898/1‑67 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCAT > 1:1900396/1‑67 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCAT > 1:4855670/1‑67 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCT > 1:6811368/1‑59 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCT > 1:1727398/1‑59 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCT > 1:5969670/1‑59 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCT < 1:5081601/59‑1 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCT > 1:4696062/1‑59 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCT < 1:2460162/59‑1 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCT > 1:4173859/1‑59 AAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCT > 1:357117/1‑59 GCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTT < 1:3305495/71‑1 GCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTT < 1:1788248/71‑1 GCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTT < 1:3814816/71‑1 GCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTT < 1:1045376/71‑1 GCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCG < 1:583137/67‑1 GCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCG < 1:2709675/67‑1 GCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCG < 1:2869163/67‑1 CGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTTG > 1:6598902/1‑71 TGTTTCTGGAACAGCGTGTCGCCACTGGTTGAGGTCGCTTTCAGCTGCTGGAACTGACTCCAGCTGGTGTAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1547585‑1547512‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTTG > minE/1547550‑1547619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |