| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1763570 = | 132 (1.240) | 4 (0.040) | 3/86 | NT | 3.4% | noncoding (274/1542 nt) | rrsG | 16S ribosomal RNA |
| ? | minE | 1763593 = | 115 (1.240) | noncoding (251/1542 nt) | rrsG | 16S ribosomal RNA | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1763642‑1763570‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccaaCAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACAT > minE/1763593‑1763662 GGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACC < 1:5186271/71‑1GGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCAC > 1:6786038/1‑70 CTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAA < 1:6420567/68‑1 CTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAA < 1:230057/68‑1 CTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAA < 1:5211833/68‑1 CTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAA < 1:1269480/68‑1 CTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAA < 1:4056081/68‑1 CGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCA > 1:6698994/1‑46 CGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCA > 1:3328188/1‑46 CGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCA > 1:5116660/1‑46 ATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCA > 1:6137537/1‑43 TGTGCCCAGATGGGATTAGCTTGTTGGTTGGGTAACGGCTCACCAA < 1:1322994/46‑1 TGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAA < 1:2486906/46‑1 TGTACCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAA < 1:4108783/46‑1 GTTGGTGGGGTAACGGCTCTCCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGT > 1:4753940/1‑71 TTGGTGGGGTAACGGCTCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTC > 1:4061089/1‑71 TTGGTGGGGTAACGGCTCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTC > 1:6139877/1‑71 GGGTAACGGCTCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAA > 1:6304146/1‑51 CACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTC > 1:3474528/1‑67 ACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCG < 1:4844489/71‑1 CCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAA > 1:6426969/1‑48 CCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAA > 1:2257199/1‑48 CAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGAC > 1:4582595/1‑71 CAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCACCTCTTTGGTCTTGC > 1:1956287/1‑68 AACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCT < 1:364118/64‑1 ACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGA < 1:6848400/68‑1 ACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGA < 1:2058613/68‑1 ACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACAT > 1:2967874/1‑71 ACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACAT < 1:5827897/71‑1 ACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACAT < 1:3381385/71‑1 ACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACAT < 1:3600293/71‑1 ACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACAT < 1:3761682/71‑1 GGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1763642‑1763570‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccaaCAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACAT > minE/1763593‑1763662 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |