New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE 62035 =66 (0.620)8 (0.080) 3/90 NT 9.9% coding (1424/2352 nt) polB DNA polymerase II
?minE 62063 = 85 (0.870)coding (1396/2352 nt) polB DNA polymerase II

Only 100 of 111 total aligned reads displayed.

ACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCAGGCTGCGC  >  minE/61994‑62132
                                                                     |                                                                     
aCAGCGGTTTGTTAACCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCggcagg                                                                      >  1:5921895/1‑71 (MQ=255)
 cAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCggcaggc                                                                     <  1:452954/71‑1 (MQ=255)
     ttctcgatgcctggttctcgcgagaaaaacattgccTGCCAGATGTTAGTCACAATCTCCGGCAGGCAAt                                                                  >  1:6638568‑M1/37‑70 (MQ=255)
         tGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttt                                                              <  1:1968720/70‑1 (MQ=255)
         tGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttt                                                              <  1:2810105/70‑1 (MQ=255)
                cTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTcgcg                                                      <  1:1619099/71‑1 (MQ=255)
                cTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTcgcg                                                      <  1:1610873/71‑1 (MQ=255)
                   gCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCTGCAGGCAATGTTTTTCTCGCgag                                                    <  1:303571/70‑1 (MQ=255)
                   gCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCgag                                                    <  1:3661449/70‑1 (MQ=255)
                   gCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCgag                                                    <  1:4145916/70‑1 (MQ=255)
                   gCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCgag                                                    <  1:1200601/70‑1 (MQ=255)
                      tttGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTcgcg                                                      <  1:4392780/65‑1 (MQ=255)
                        tGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCgag                                                    >  1:5323576/1‑65 (MQ=255)
                        tGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGaa                                                  >  1:6403346/1‑67 (MQ=255)
                        tGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGaa                                                  >  1:2546587/1‑67 (MQ=255)
                        tGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCa                                               <  1:5842911/70‑1 (MQ=255)
                        tGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAg                                              >  1:3958647/1‑71 (MQ=255)
                          gCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCgag                                                    <  1:4395413/63‑1 (MQ=255)
                          gCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCgag                                                    <  1:2874840/63‑1 (MQ=255)
                          gCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCgag                                                    <  1:2314811/63‑1 (MQ=255)
                            ttCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAAcc                                                <  1:3516902/65‑1 (MQ=255)
                            ttCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAAcc                                                <  1:1112399/65‑1 (MQ=255)
                             tCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCggcag                                                                       >  1:6284593/1‑41 (MQ=255)
                             tCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttt                                                              >  1:3823791/1‑50 (MQ=255)
                             tCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttt                                                              >  1:3468993/1‑50 (MQ=255)
                             tCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttt                                                              >  1:981510/1‑50 (MQ=255)
                             tCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttt                                                              >  1:696651/1‑50 (MQ=255)
                             tCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttt                                                              >  1:1576703/1‑50 (MQ=255)
                             tCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATc                                         >  1:3449004/1‑71 (MQ=255)
                             tCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATc                                         >  1:5323771/1‑71 (MQ=255)
                              cATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAg                                              >  1:5385245/1‑65 (MQ=255)
                              cATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAg                                              >  1:3702330/1‑65 (MQ=255)
                              cATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAg                                              >  1:2371102/1‑65 (MQ=255)
                              cATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATc                                         >  1:2305623/1‑70 (MQ=255)
                               aTCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCATTGTTTTTCTCGCGAGAACCAGGCATCga                                       <  1:5377601/71‑1 (MQ=255)
                               aTCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAAc                                                 >  1:712613/1‑61 (MQ=255)
                               aTCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATc                                         >  1:5244379/1‑69 (MQ=255)
                               aTCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCga                                       <  1:3094665/71‑1 (MQ=255)
                               aTCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCga                                       <  1:262648/71‑1 (MQ=255)
                               aTCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCga                                       <  1:328032/71‑1 (MQ=255)
                               aTCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCg                                        <  1:698021/70‑1 (MQ=255)
                                tCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATg                                                                 <  1:4678526/44‑1 (MQ=255)
                                tCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATg                                                                 <  1:5829834/44‑1 (MQ=255)
                                tCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCgag                                      <  1:6582963/71‑1 (MQ=255)
                                 cgcgCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCgag                                      >  1:1048003/1‑70 (MQ=255)
                                  gcgcCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCgaga                                     <  1:3133220/70‑1 (MQ=255)
                                  gcgcCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCgaga                                     >  1:1815057/1‑70 (MQ=255)
                                   attgcctgccggagattgtgactaacatctggcaGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGaa                                    >  1:6638568‑M2/35‑70 (MQ=255)
                                      ccGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAAcc                                >  1:4694440/1‑71 (MQ=255)
                                      ccGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAAcc                                >  1:6727470/1‑71 (MQ=255)
                                        gTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttttt                                                            >  1:2680199/1‑41 (MQ=255)
                                        gTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttttt                                                            >  1:5106754/1‑41 (MQ=255)
                                        gTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttttt                                                            >  1:4106485/1‑41 (MQ=255)
                                        gTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGttttt                                                            >  1:2445628/1‑41 (MQ=255)
                                        gTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTcgc                                                       <  1:5211704/46‑1 (MQ=255)
                                        gTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTcgc                                                       <  1:4112952/46‑1 (MQ=255)
                                        gTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTcgc                                                       <  1:5838947/46‑1 (MQ=255)
                                        gTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTcgc                                                       <  1:1511474/46‑1 (MQ=255)
                                        gTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCtt                              >  1:3905283/1‑71 (MQ=255)
                                        gTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCtt                              >  1:5069282/1‑71 (MQ=255)
                                              gATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTAc                        <  1:258392/71‑1 (MQ=255)
                                               aTGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTcgc                                                       <  1:6786654/39‑1 (MQ=255)
                                                tGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACtg                      >  1:5643775/1‑71 (MQ=255)
                                                tGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACtg                      >  1:3837441/1‑71 (MQ=255)
                                                tGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACtg                      <  1:4972405/71‑1 (MQ=255)
                                                 gTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCga                                                     >  1:4340216/1‑39 (MQ=255)
                                                 gTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCga                                                     >  1:1068518/1‑39 (MQ=255)
                                                 gTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCga                                                     >  1:1437433/1‑39 (MQ=255)
                                                 gTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCga                                                     >  1:3104657/1‑39 (MQ=255)
                                                 gTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCga                                                     >  1:3926072/1‑39 (MQ=255)
                                                 gTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCga                                                     >  1:3917805/1‑39 (MQ=255)
                                                 gTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACtgt                     >  1:6631205/1‑71 (MQ=255)
                                                   tAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGc                   >  1:881812/1‑71 (MQ=255)
                                                   tAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGc                   >  1:2337294/1‑71 (MQ=255)
                                                     tgactaacatctggcaGGCAATGTTTTTCTCGCGAGAACCAgg                                             <  1:3548879‑M2/27‑1 (MQ=255)
                                                     tgactaacatctggcaGGCAATGTTTTTCTCGCGAGAACCAgg                                             <  1:747988‑M2/27‑1 (MQ=255)
                                                     tgactaacatctggcaGGCAATGTTTTTCTCGCGAGAACCAgg                                             <  1:1411801‑M2/27‑1 (MQ=255)
                                                     tgactaacatctggcaGGCAATGTTTTTCTCGCGAGAACCAgg                                             <  1:612726‑M2/27‑1 (MQ=255)
                                                      tCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTc                             <  1:3143521/58‑1 (MQ=255)
                                                      tCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTc                             <  1:1148144/58‑1 (MQ=255)
                                                       actaacatctggcaGGCAATGTTTTTCTCGCGAGAACCAGGCa                                           >  1:2776394‑M2/15‑43 (MQ=255)
                                                       actaacatctggcaGGCAATGTTTTTCTCGCGAGAACCAGGCa                                           >  1:1392877‑M2/15‑43 (MQ=255)
                                                       actaacatctggcaGGCAATGTTTTTCTCGCGAGAACCAGGCa                                           >  1:1517441‑M2/15‑43 (MQ=255)
                                                        acaATCTCCGGCAGGCAATGTTTTTCTCGCGAGAAc                                                 >  1:1776926/1‑36 (MQ=255)
                                                        acaATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCga                                       >  1:72934/1‑46 (MQ=255)
                                                        acaATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCga                                       >  1:3139688/1‑46 (MQ=255)
                                                        acaATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTg               >  1:916464/1‑70 (MQ=255)
                                                          aaTCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCgag                                      <  1:1704648/45‑1 (MQ=255)
                                                           aTCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGAt            >  1:2601900/1‑70 (MQ=255)
                                                            tctcCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGaa                                    >  1:2429741/1‑45 (MQ=255)
                                                              tcCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGaa                                    <  1:1329389/43‑1 (MQ=255)
                                                              tcCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGaa                                    <  1:118687/43‑1 (MQ=255)
                                                              tcCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCAgg        >  1:1520836/1‑71 (MQ=255)
                                                              tcCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCAgg        >  1:6492839/1‑71 (MQ=255)
                                                              tcCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCAgg        >  1:6104732/1‑71 (MQ=255)
                                                                cGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGaaaa                                  >  1:2482856/1‑43 (MQ=255)
                                                                cGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGaaaa                                  >  1:6838090/1‑43 (MQ=255)
                                                                cGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCa          <  1:6593494/67‑1 (MQ=255)
                                                                   caGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCAGGCt      >  1:6058500‑M2/3‑68 (MQ=255)
                                                                     ggcaATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCa          <  1:3694236/62‑1 (MQ=255)
                                                                     |                                                                     
ACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCAGGCTGCGC  >  minE/61994‑62132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.