| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 215622 | 48 (0.450) | 58 (1.250) +TTTAATATCAGTAAACCGGACATAACC |
23/44 | NT | 68.7% | coding (732/732 nt) | dnaQ | DNA polymerase III epsilon subunit |
| ? | minE | 2705182 = | 73 (0.690) | intergenic (+106/‑1) | damX/dam | hypothetical protein/DNA adenine methylase | |||||
Only 100 of 221 total aligned reads displayed.
GTTGCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > minE/2705114‑2705251 | gTTGCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCAt > 1:345527/1‑71 (MQ=255)gTTGCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCAt > 1:1422055/1‑71 (MQ=255)gTTGCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCAt > 1:5828151/1‑71 (MQ=255) gtgcagaagaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATg > 1:2557482‑M2/67‑70 (MQ=255) gCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATg > 1:377793/1‑69 (MQ=255) gCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATg > 1:5408552/1‑69 (MQ=255) agaagaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATgaaga < 1:3156146‑M2/8‑1 (MQ=255) gaagaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaa < 1:4321990‑M2/10‑1 (MQ=255) gAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGc > 1:5798571/1‑62 (MQ=255) agaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaaaa < 1:115296‑M2/12‑1 (MQ=255) aGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGaaaaa > 1:3407044/1‑71 (MQ=255) gaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAAt > 1:4014187‑M2/59‑71 (MQ=255) gaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAAt > 1:4657831‑M2/59‑71 (MQ=255) gaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAAt > 1:5859847‑M2/59‑71 (MQ=255) aaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATcg < 1:5308577‑M2/15‑1 (MQ=255) ggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATcgcg < 1:2262234‑M2/17‑1 (MQ=255) ggATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCgcgc > 1:1483442/1‑71 (MQ=255) gCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATc > 1:1381403/1‑63 (MQ=255) gCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCtttt > 1:890775/1‑71 (MQ=255) gttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtttttt < 1:4474676‑M2/24‑1 (MQ=255) gttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtttttt < 1:1651971‑M2/24‑1 (MQ=255) ttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg < 1:3716479‑M2/25‑1 (MQ=255) ttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg < 1:2344067‑M2/25‑1 (MQ=255) ttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg < 1:509806‑M2/25‑1 (MQ=255) ttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg < 1:2874510‑M2/25‑1 (MQ=255) tgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCTCTTTTTTg < 1:2635056‑M2/25‑1 (MQ=255) tgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg > 1:1807756‑M2/46‑70 (MQ=255) tgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg > 1:6909709‑M2/46‑70 (MQ=255) tCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTg > 1:882159/1‑70 (MQ=255) tCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGa < 1:3544248/71‑1 (MQ=255) gcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGa < 1:1003722‑M2/26‑1 (MQ=255) ggAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGaaaaa > 1:6157061/1‑55 (MQ=255) cctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGaa < 1:5086722‑M2/27‑1 (MQ=255) gAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGt < 1:5749662/71‑1 (MQ=255) gCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTgg > 1:282036/1‑71 (MQ=255) gCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTgg < 1:4375220/71‑1 (MQ=255) ctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaa < 1:6792058‑M2/10‑1 (MQ=255) ctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTgg > 1:6019789‑M2/41‑71 (MQ=255) tggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATcg < 1:1692665‑M2/15‑1 (MQ=255) tggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTg < 1:5953420‑M2/30‑1 (MQ=255) cTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTggg < 1:2516407/71‑1 (MQ=255) ttCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTggg > 1:2789746/1‑69 (MQ=255) gcgagcataatttaatatcagtaaaccggacataaccCATgaa > 1:3292605‑M2/38‑43 (MQ=255) gcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtttttt < 1:3632120‑M2/24‑1 (MQ=255) gcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTggg > 1:4224318‑M2/38‑69 (MQ=255) gcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGc > 1:905235‑M2/38‑70 (MQ=255) tctcCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa < 1:707427/70‑1 (MQ=255) gagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgg > 1:1774738‑M2/36‑71 (MQ=255) gagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgg > 1:6624608‑M2/36‑71 (MQ=255) gcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGa < 1:5718941‑M2/26‑1 (MQ=255) ccACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGaaaa < 1:3829653/44‑1 (MQ=255) ccACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGaaaa < 1:4184055/44‑1 (MQ=255) cacaGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAggg < 1:6148770/69‑1 (MQ=255) ataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc < 1:6052114‑M2/40‑1 (MQ=255) acaGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc < 1:390740/71‑1 (MQ=255) taatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtttttt < 1:3953446‑M2/24‑1 (MQ=255) taatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa < 1:4975676‑M2/41‑1 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAAt > 1:4814009/1‑43 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGTCAGGGGGCa < 1:4712096/71‑1 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc > 1:1048419/1‑70 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc > 1:4959380/1‑70 (MQ=255) ccGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGt < 1:6298494/71‑1 (MQ=255) tcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCt > 1:3474300‑M2/21‑71 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAg > 1:2702578‑M2/19‑46 (MQ=255) tgtAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc > 1:4119484/1‑70 (MQ=255) taaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGt < 1:1008837‑M2/44‑1 (MQ=255) tAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGt < 1:1575560/44‑1 (MQ=255) tAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcc < 1:6206141/63‑1 (MQ=255) tAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCtt < 1:2026089/70‑1 (MQ=255) aaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGa > 1:6538909‑M2/16‑41 (MQ=255) aaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATc > 1:795179‑M2/15‑61 (MQ=255) aaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtga > 1:3249088‑M2/15‑71 (MQ=255) ttagttagTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa > 1:6945613/1‑53 (MQ=255) ttagttagTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa > 1:5891245/1‑53 (MQ=255) ttagttagTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgatg < 1:5344909/71‑1 (MQ=255) ttagttagTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgatg < 1:3998770/71‑1 (MQ=255) ttagtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgatga < 1:6034631/68‑1 (MQ=255) ttagtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGatat > 1:6655645/1‑71 (MQ=255) ataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGc < 1:4838816‑M2/33‑1 (MQ=255) ataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGc < 1:4433837‑M2/33‑1 (MQ=255) ataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATc < 1:1968935‑M2/47‑1 (MQ=255) ataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATc < 1:3223979‑M2/47‑1 (MQ=255) ataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTa < 1:5378509‑M2/65‑1 (MQ=255) ataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTa < 1:4550536‑M2/65‑1 (MQ=255) agtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtga > 1:2103083/1‑63 (MQ=255) agtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtga > 1:6722347/1‑63 (MQ=255) agtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGata > 1:2246012/1‑68 (MQ=255) agtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATAtt > 1:6600336/1‑70 (MQ=255) gtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTa < 1:2922166/70‑1 (MQ=255) gtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTa < 1:1727746/70‑1 (MQ=255) gtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTa < 1:4340506/70‑1 (MQ=255) tCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTAt < 1:3341136/50‑1 (MQ=255) aaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATccc > 1:5676395‑M2/5‑53 (MQ=255) ccCATGAAGAAAAATCGCTCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACg < 1:5315530‑M2/69‑1 (MQ=255) gCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTaa > 1:110266/1‑67 (MQ=255) gCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACgg > 1:326676/1‑71 (MQ=255) cATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGt < 1:6126915/44‑1 (MQ=255) cATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACgg > 1:3515073/1‑70 (MQ=255) cATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACgg > 1:6883480/1‑70 (MQ=255) cATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACgg > 1:5565786/1‑70 (MQ=255) | GTTGCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > minE/2705114‑2705251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |