| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2928756 | 138 (1.300) | 11 (0.120) | 3/88 | NT | 7.4% | coding (55/1083 nt) | yjgQ | conserved inner membrane protein |
| ? | minE | = 2928777 | 150 (1.580) | coding (76/1083 nt) | yjgQ | conserved inner membrane protein | |||||
Only 100 of 205 total aligned reads displayed.
ACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGC > minE/2928707‑2928847 | aCCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGc > 1:4389072/1‑71 (MQ=255) ttGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtggtg < 1:2816612‑M2/71‑6 (MQ=255) tGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGgtgt > 1:6810898/1‑71 (MQ=255) gCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTc < 1:2836341/70‑1 (MQ=255) tACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTg < 1:3853887/71‑1 (MQ=255) cTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtgg < 1:6654560‑M2/61‑4 (MQ=255) cTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtgg < 1:6497835‑M2/61‑4 (MQ=255) cTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtgg < 1:5222892‑M2/61‑4 (MQ=255) gACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtg < 1:2569626‑M2/57‑3 (MQ=255) gACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtg < 1:729196‑M2/57‑3 (MQ=255) gACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtg < 1:39104‑M2/57‑3 (MQ=255) gACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtg < 1:1561363‑M2/57‑3 (MQ=255) gACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTc > 1:5452081/1‑68 (MQ=255) gACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCggg > 1:540423/1‑71 (MQ=255) gACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCggg > 1:6524492/1‑71 (MQ=255) cTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTa > 1:2601938/1‑71 (MQ=255) atatCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt < 1:5384015/60‑1 (MQ=255) atatCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt < 1:5635361/60‑1 (MQ=255) atatCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt < 1:6116755/60‑1 (MQ=255) atCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTc < 1:513343/59‑1 (MQ=255) atCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTc < 1:6747780/59‑1 (MQ=255) atCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTa > 1:1652604/1‑67 (MQ=255) atCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTa > 1:4214719/1‑67 (MQ=255) tCGGTAAAACTATTTTCACCACCATCATGATGTCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAg > 1:4971446/1‑71 (MQ=255) ggTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtgg < 1:2175537‑M2/46‑4 (MQ=255) ggTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtgg < 1:920115‑M2/46‑4 (MQ=255) ggTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGtt > 1:1298472/1‑71 (MQ=255) ggTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGt < 1:1096758/70‑1 (MQ=255) tAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt < 1:3184094/53‑1 (MQ=255) tAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt < 1:5433935/53‑1 (MQ=255) tAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt < 1:5487179/53‑1 (MQ=255) tAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt < 1:4287721/53‑1 (MQ=255) tAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt < 1:4517160/53‑1 (MQ=255) tAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt < 1:854186/53‑1 (MQ=255) aaaaCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTg > 1:2618610/1‑70 (MQ=255) aaaaCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGt > 1:6340487/1‑71 (MQ=255) aaaaCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGt > 1:3074184/1‑71 (MQ=255) cTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt < 1:1230987/71‑1 (MQ=255) ttttCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTc < 1:1893850/65‑1 (MQ=255) ttttCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATc < 1:3648989/69‑1 (MQ=255) ttCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCt > 1:2041063/1‑71 (MQ=255) tCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCg > 1:160280/1‑44 (MQ=255) tCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCg > 1:4229639/1‑44 (MQ=255) tCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCg > 1:2748254/1‑44 (MQ=255) accaccATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaa < 1:3230396/71‑1 (MQ=255) accaccATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaa < 1:785628/71‑1 (MQ=255) accaccATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaa < 1:6687219/71‑1 (MQ=255) ccaccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGttt < 1:4106552/56‑1 (MQ=255) ccaccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGttt < 1:2469184/56‑1 (MQ=255) ccaccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaaa < 1:3529034/71‑1 (MQ=255) caccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaaaa < 1:4615454/71‑1 (MQ=255) accaTCATGATGACACTGTTCATGCTGGTGTCGCt > 1:3267538/1‑35 (MQ=255) accaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGt > 1:4881828/1‑56 (MQ=255) accaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGt > 1:2478070/1‑56 (MQ=255) accaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaaaaa < 1:2334045/71‑1 (MQ=255) ccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaaaaaa < 1:3737411/71‑1 (MQ=255) catcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCAt < 1:2151949/42‑1 (MQ=255) catcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAg < 1:2257123/71‑1 (MQ=255) catcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAg > 1:150593/1‑71 (MQ=255) ctcatGATGACACTGTTCATGCTGGTGTCGCTGTc < 1:3884692/34‑1 (MQ=255) atcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaaaaaa > 1:4715462/1‑69 (MQ=255) atcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGc < 1:1518826/71‑1 (MQ=255) tcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATc > 1:3567355/1‑57 (MQ=255) tcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCa > 1:4794251/1‑58 (MQ=255) tcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGcc > 1:89104/1‑71 (MQ=255) tcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGcc > 1:2346246/1‑71 (MQ=255) catGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAg > 1:6461739/1‑68 (MQ=255) catGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAg > 1:5757874/1‑68 (MQ=255) atgatgACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaaaaa > 1:4050761/1‑65 (MQ=255) atgatgACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCgg > 1:4011247/1‑71 (MQ=255) atgatgACACTGTTCATCCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCg < 1:3551900/70‑1 (MQ=255) tgatgaCACTGTTCATGCtggtggtgaaaatagttttaccgatatagcggtcaagtacgccaaaaggttgc > 1:1233754‑M2/1‑18 (MQ=255) tgatgaCACTGTTCATGCtggtggtgaaaatagttttaccgatatagcggtcaagta < 1:3089236‑M2/57‑40 (MQ=255) tgatgaCACTGTTCATGCtggtggtgaaaatagttttaccgatatagcggtcaagta < 1:6018106‑M2/57‑40 (MQ=255) tgatgaCACTGTTCATGCtggtggtgaaaatagttttaccgatatagcggtcaagta < 1:2680320‑M2/57‑40 (MQ=255) tgatgaCACTGTTCATGCtggtggtgaaaatagttttaccgatatagcggtcaagta < 1:2497724‑M2/57‑40 (MQ=255) tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCggg > 1:1353886/1‑71 (MQ=255) tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCggg > 1:6954418/1‑71 (MQ=255) atgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGc < 1:1982581/70‑1 (MQ=255) tgaCACTGTTCATGCTTGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAg > 1:3336929/1‑71 (MQ=255) tgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt > 1:5298266/1‑50 (MQ=255) tgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt > 1:758897/1‑50 (MQ=255) tgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt > 1:1175699/1‑50 (MQ=255) tgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt > 1:4942718/1‑50 (MQ=255) tgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt > 1:2064308/1‑50 (MQ=255) tgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCa < 1:1344917/70‑1 (MQ=255) tgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAg > 1:5041692/1‑71 (MQ=255) acacTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaa < 1:103974/56‑1 (MQ=255) acacTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCggg < 1:2862114/66‑1 (MQ=255) acacTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCggg < 1:6175475/66‑1 (MQ=255) acacTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCggg < 1:1940261/66‑1 (MQ=255) acacTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCggg < 1:5094592/66‑1 (MQ=255) cTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAg < 1:4768967/71‑1 (MQ=255) gTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGt > 1:3031525/1‑70 (MQ=255) ttCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGt < 1:2774238/69‑1 (MQ=255) tCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTac > 1:514538/1‑71 (MQ=255) cATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTac < 1:5472047/70‑1 (MQ=255) aTGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTacg < 1:4201326/70‑1 (MQ=255) tGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTacgac < 1:2562366/71‑1 (MQ=255) cTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGAcgc > 1:3008870/1‑71 (MQ=255) | ACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGC > minE/2928707‑2928847 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |