| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1826496 | 63 (1.290) | 3 (0.080) | 4/78 | NT | 6.0% | intergenic (‑173/‑262) | hydN/mutS | formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit/methyl‑directed mismatch repair protein |
| ? | minE | = 1826503 | 45 (1.180) | intergenic (‑180/‑255) | hydN/mutS | formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit/methyl‑directed mismatch repair protein | |||||
GTCATCGACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGT > minE/1826433‑1826572 | gTCATCGACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTGTTTatat > 1:2981223/1‑71 (MQ=255) tCATCGACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTatat < 1:1963033/70‑1 (MQ=255) aTCGTCACTAGTGTCGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATtac > 1:41920‑M2/1‑68 (MQ=255) cGACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATtacat < 1:699069‑M2/71‑6 (MQ=255) gACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATtacatc < 1:1140403‑M2/71‑7 (MQ=255) gACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATtacatc < 1:1828360‑M2/71‑7 (MQ=255) acTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATtacatctta > 1:1528680‑M2/1‑62 (MQ=255) aGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatc > 1:1738835/1‑71 (MQ=255) aGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTAATATAAAtacatctta < 1:276169‑M2/68‑10 (MQ=255) tGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatctt < 1:890022/71‑1 (MQ=255) tGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatct > 1:1697735/1‑70 (MQ=255) tGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatct > 1:2646440/1‑70 (MQ=255) aCGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatctta < 1:1468487/70‑1 (MQ=255) aCGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatctta > 1:1204422/1‑70 (MQ=255) aCGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTAATATAAAtacatctta < 1:1582991‑M2/64‑10 (MQ=255) aCGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTAATATAAAtacatctta < 1:1735299‑M2/64‑10 (MQ=255) cGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatctta < 1:1160144/69‑1 (MQ=255) gATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTTCATCTTAATCTTAAAg < 1:66012/71‑1 (MQ=255) gATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAg < 1:1607110/71‑1 (MQ=255) aTGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATtacatct > 1:269540‑M2/1‑52 (MQ=255) aTGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATtacatct > 1:1629401‑M2/1‑52 (MQ=255) aTGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatctta < 1:116597/67‑1 (MQ=255) aTGACATGTGATGACAATGTGCAGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatctta < 1:1549875/67‑1 (MQ=255) gACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTaaa > 1:2268971/1‑67 (MQ=255) aCATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTatat < 1:229233/49‑1 (MQ=255) aCATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTatat < 1:2611955/49‑1 (MQ=255) aCATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTatat < 1:2781755/49‑1 (MQ=255) cATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCaa < 1:109322/71‑2 (MQ=255) cATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCAc > 1:1630670/1‑71 (MQ=255) cATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCAc > 1:1850378/1‑71 (MQ=255) cATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCAc > 1:2955124/1‑71 (MQ=255) cATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCAc < 1:1075447/71‑1 (MQ=255) aTGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATta < 1:18772‑M2/49‑3 (MQ=255) aTGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCAc < 1:431881/70‑1 (MQ=255) aTGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACt < 1:3006964/71‑1 (MQ=255) aTGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACt < 1:231424/71‑1 (MQ=255) tgtgATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACAtcttaatcttaa < 1:525302/62‑1 (MQ=255) tgtgATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCAc < 1:2438960/69‑1 (MQ=255) tgtgATGACAATGTGCTGCCTACACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCAc < 1:371573/69‑1 (MQ=255) gtgATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatctta < 1:1874612/60‑1 (MQ=255) tgatgaCAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTa > 1:381319/1‑69 (MQ=255) tgatgaCAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTa > 1:441558/1‑69 (MQ=255) tgatgaCAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTa > 1:1381156/1‑69 (MQ=255) tgaCAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatctt < 1:420409/55‑1 (MQ=255) gaCAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTc > 1:2167542/1‑71 (MQ=255) gaCAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTc > 1:1409091/1‑71 (MQ=255) aCAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTc > 1:349521/1‑70 (MQ=255) cAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATtacatctta > 1:1205440‑M2/1‑38 (MQ=255) aaTGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatct > 1:2741814/1‑50 (MQ=255) aaTGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatct > 1:2281973/1‑50 (MQ=255) aaTGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACatcttaatc > 1:3031978/1‑49 (MQ=255) aTGTGCTGCCTCCACCTCATTAAGATGTATTTATATtacatcttaat < 1:1752660‑M2/47‑12 (MQ=255) aTGTGCTGCCTCCACCTCATTAAGATGTATTTATATtac > 1:1971583‑M2/1‑36 (MQ=255) aTGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCaaa < 1:2921709/71‑1 (MQ=255) aTGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCa > 1:2649661/1‑69 (MQ=255) tgtgCTGCCTCCACCTCATTAAGATGTATTTATATtacat < 1:620176‑M2/40‑6 (MQ=255) gtgCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGa < 1:3059204/62‑1 (MQ=255) gtgCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAaag > 1:2040951/1‑70 (MQ=255) tgctgcCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAaaga < 1:1396732/70‑1 (MQ=255) ctgcCTCCACCTCATTAAGATGTATTTATATTACAtcttaatcttaa > 1:2378046/1‑47 (MQ=255) ccTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAaagaagaag < 1:253369/70‑1 (MQ=255) cTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAggg < 1:2497473/71‑1 (MQ=255) cTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAggg < 1:501327/71‑1 (MQ=255) cTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAggg > 1:157011/1‑71 (MQ=255) cTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAggg > 1:2707802/1‑71 (MQ=255) cACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGc > 1:1520773/1‑45 (MQ=255) cACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGt < 1:1775688/69‑1 (MQ=255) cACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGt < 1:2559506/69‑1 (MQ=255) cTCATTAAGATGTATTTATATTACatcttaatctta < 1:2881985/36‑1 (MQ=255) cTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGc > 1:985884/1‑70 (MQ=255) cATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCaa > 1:389178/1‑71 (MQ=255) aTTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAAc > 1:2879295/1‑71 (MQ=255) aTTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAAc > 1:304834/1‑71 (MQ=255) ttAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAAcc < 1:1937589/71‑1 (MQ=255) ttAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAAc < 1:2402489/70‑1 (MQ=255) aaGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGAc > 1:2749166/1‑44 (MQ=255) aaGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGAc > 1:683129/1‑44 (MQ=255) aGATGTATTTATATtacatcttaatgaggtggaggcagcacattgtcatcacatgtcatcgtca < 1:118684‑M2/64‑51 (MQ=255) gATGTATTTATATTACATCTTAATCTTAAAGGGCACTAt < 1:2711563/39‑1 (MQ=255) aTGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATa > 1:836568/1‑70 (MQ=255) tATTTATATtacatcttaatgaggtggaggcagcac > 1:2351217‑M2/1‑9 (MQ=255) tATTTATATtacatcttaatgaggtggaggcagcac > 1:2772190‑M2/1‑9 (MQ=255) tATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAAt < 1:1467999/71‑1 (MQ=255) tATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAAt < 1:1097830/71‑1 (MQ=255) aTTTATATTACATCTTAATCTTAAAGGGCACTATg > 1:2311399/1‑35 (MQ=255) ttACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGt < 1:856620/70‑1 (MQ=255) ttACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGt < 1:96977/70‑1 (MQ=255) ttACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTCTGCGt < 1:702267/70‑1 (MQ=255) | GTCATCGACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGT > minE/1826433‑1826572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |