| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 839554 = | 66 (1.230) | 8 (0.160) | 3/92 | NT | 9.9% | coding (750/843 nt) | purU | formyltetrahydrofolate hydrolase |
| ? | minE | 839587 = | 85 (1.720) | coding (717/843 nt) | purU | formyltetrahydrofolate hydrolase | |||||
AGGCCCAATCATCATGCAGGACGTTATTCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/839626‑839554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtATGATCGACATGAATAACGTCCTGCATGATGATTGGGCCTTCGTCCAGAT > minE/839587‑839636 AGGCCCAATCATCATGCAGGACGTTATTCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCAG > 1:2582737/1‑71 GGCCCAATCATCATGCAGGACGTTATTCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCAGG > 1:1255580/1‑71 GGCCCAATCATCATGCAGGACGTTATTCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCAGG < 1:1322499/71‑1 GGCCCAATCATCATGCAGGACGTTATTCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCAGG < 1:3243871/71‑1 GGCCCAATCATCATGCAGGACGTTATTCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCAGG < 1:3068210/71‑1 ATGCAGGACGTTATTCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCA > 1:2918738/1‑57 TCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCA > 1:627193/1‑43 TACCTACACAGCTGAAGATATGATGCGCGCAGGTATGATCGACATGAATAACGTCCTGCAT < 1:113311/61‑1 TACCTACACAGCTGAAGATATGATGCGCGCAGGTATGATCGACATGAATAACGTCCTGCAT < 1:365054/61‑1 CCTACACAGCTGAAGATATGATGCGCGCAGGTATGATCGACATGAATAACGTCCTGCATGA > 1:289866/1‑61 CCTACACAGCTGAAGATATGATGCGCGCAGGTATGATCGACATGAATAACGTCCTGCATGA > 1:2675167/1‑61 CCTACACAGCTGAAGATATGATGCGCGCAGGTATGATCGACATGAATAACGTCCTGCATGA > 1:3479185/1‑61 CCTACACAGCTGAAGATATGATGCGCGCAGGTATGATCGACATGAATAACGTCCTGCATGA > 1:659202/1‑61 CCTACACAGCTGAAGATATGATGCGCGCAGGTATGATCGACATGAATAACGTCCTGC < 1:2220735/57‑1 CCTACACAGCTGAAGATATGATGCGCGCAGGTATGATCGACATGAATAACGTCCTGC < 1:89611/57‑1 GGTATGATCGACATGAATAACGTCCTGCATGATGATTGGGCCTTCGTCCAGAT > 1:2859063/1‑53 GGTATGATCGACATGAATAACGTCCTGCATGATGATTGGGCCTTCGTCCAGAT > 1:3043358/1‑53 AGGCCCAATCATCATGCAGGACGTTATTCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/839626‑839554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtATGATCGACATGAATAACGTCCTGCATGATGATTGGGCCTTCGTCCAGAT > minE/839587‑839636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |