| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 144964 = | 34 (0.890) | 14 (0.460) +AAGAACTGTT |
3/78 | NT | 37.0% | coding (388/441 nt) | yadI | predicted PTS Enzyme IIA |
| ? | W3110S.gb | 1578175 = | 26 (0.680) | coding (1159/2373 nt) | yddB | predicted porin protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TTTTTTTGTTGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/144977‑144964‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTGAAGGTGTAA > W3110S.gb/1578175‑1578188 |||||||||| aTTTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA < 1:1418319/36‑1aTTTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA < 1:3106608/36‑1 TTTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA < 1:1919791/36‑1 TTTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA > 1:2657028/1‑36 TTTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA < 1:2867126/36‑1 TTTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA < 1:3190548/36‑1 TTTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA < 1:3473624/36‑1 TTTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA > 1:3508260/1‑36 TTTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA < 1:695144/36‑1 TTTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA < 1:795464/36‑1 TTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTAg > 1:1158998/1‑35 TTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTAg < 1:2784358/36‑2 TTTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTA > 1:1084881/1‑35 TTTTGTTGTTGAAGAACTGTTTTTTGAAGGTGTAg < 1:142684/35‑2 |||||||||| TTTTTTTGTTGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/144977‑144964‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTGAAGGTGTAA > W3110S.gb/1578175‑1578188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |