| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3721256 | 46 (1.200) | 16 (0.490) +TTTCAAT |
3/84 | NT | 32.1% | intergenic (+126/‑227) | atpC/glmU | F1 sector of membrane‑bound ATP synthase, epsilon subunit/fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyl transferase |
| ? | W3110S.gb | 3931426 = | 33 (0.860) | coding (1485/1692 nt) | eptB | predicted metal dependent hydrolase | |||||
CTGTTTTCCTGTTTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3721240‑3721256‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATGTCAGATAAATA > W3110S.gb/3931426‑3931440 ||||||| tTGTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAAT < 1:1048223/37‑1tTGTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAAT < 1:1167964/37‑1tTGTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAAT < 1:2359972/37‑1tTGTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAAT < 1:727547/37‑1tTGTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAA < 1:1507670/36‑1tTGTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAA < 1:3181291/36‑1tTGTTTTCCTGTTTCTTTTTCAATGATGTCAGATAA < 1:2168559/35‑1 TGTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAATt > 1:1522072/1‑37 TGTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAAT < 1:1705872/37‑1 TGTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAA < 1:2079721/36‑1 GTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAATt > 1:1301052/1‑36 GTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAATt > 1:2456335/1‑36 GTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAAT > 1:1413530/1‑36 GTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAAT < 1:625902/36‑1 GTTTTCCTGTTTCTTTTTCAATGATGTCAGATAAA < 1:2150284/35‑1 TTTCCTGTTTCTTTTTCAATGATGTCAGATAAATt > 1:3048882/1‑34 ||||||| CTGTTTTCCTGTTTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3721240‑3721256‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATGTCAGATAAATA > W3110S.gb/3931426‑3931440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |