| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | W3110S.gb | 3,750,593 | Δ1,199 bp | 100% | insH | insH | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 3750593–3751791 | 3751791 | 1–1199 | 107 [0] | [0] 105 | insH | insH |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3750592 | 0 (0.000) | 81 (2.300) | 51/90 | NT | 100% | intergenic (‑104/‑69) | tnaA/insH | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/IS5 element protein |
| ? | W3110S.gb | 3751792 = | 0 (0.000) | intergenic (+151/+116) | insH/tnaC | IS5 element protein/tryptophanase leader peptide | |||||
Only 100 of 108 total aligned reads displayed.
TCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3750522‑3750592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > W3110S.gb/3751792‑3751861 TCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA < 1:2525404/71‑1 CCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA > 1:2811168/1‑70 TGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAC > 1:2815669/1‑70 TGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAC > 1:3062789/1‑70 TGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAG > 1:1631942/1‑71 TGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACA < 1:2454998/69‑1 TGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTAC > 1:3064843/1‑62 AATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGT > 1:1995269/1‑70 ATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAA < 1:619646/71‑1 ATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTA > 1:166774/1‑70 ATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAA > 1:1961374/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATA < 1:3226184/71‑1 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATA < 1:2761275/71‑1 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAAT > 1:1096578/1‑70 ACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAA > 1:2454133/1‑71 ACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAA > 1:2327306/1‑71 ACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAA > 1:3667803/1‑59 CATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC > 1:769264/1‑71 CATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC < 1:1077406/71‑1 ATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACG < 1:1457148/71‑1 TCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC < 1:2582187/69‑1 TCTGCTATACCGATTAATTCCCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC < 1:1449863/69‑1 CTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC > 1:2230195/1‑68 CTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAA < 1:1595585/66‑1 TGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA > 1:368110/1‑69 TGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAA > 1:2966640/1‑65 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA < 1:1232143/69‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA < 1:2668406/67‑1 TATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGAT > 1:513616/1‑71 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATG < 1:1674484/70‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGAT < 1:2036524/69‑1 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACC > 1:2425291/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACC > 1:3162922/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACC > 1:214836/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATCAC > 1:580817/1‑70 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC > 1:2076169/1‑60 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAA > 1:3451356/1‑59 CGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCT < 1:3435332/71‑1 CGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA < 1:3584468/61‑1 ATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTT < 1:1339396/71‑1 ATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACA < 1:2155679/46‑1 TAATTCTCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA > 1:454181/1‑57 AATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGC > 1:1581688/1‑70 AATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAA > 1:1552159/1‑53 ATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:2508258/71‑1 TTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAATTAAATAAACGAGAGATGACCTTTGCAAA < 1:454956/71‑1 TTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:1491402/71‑1 TTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:1499929/71‑1 TCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA > 1:2422747/1‑69 TCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGA > 1:2772247/1‑57 CGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAA < 1:3106403/70‑1 CGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAA > 1:2480434/1‑45 CGCCAGATATATATGCAAGCACCATCATTTACTAAAA > 1:2693350/1‑37 GCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAG < 1:70301/70‑1 CAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA > 1:1583096/1‑49 AGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA > 1:3494438/1‑65 TATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:1185035/1‑71 ATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA > 1:1716651/1‑44 ATATATGCAAGCACCATCATTCACTAAAACAAGTAAATAAACGAGAGATG > 1:3439617/1‑50 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTA < 1:3422244/71‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT < 1:1124796/70‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT < 1:1974998/70‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCT < 1:2814176/53‑1 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:3563749/1‑67 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA < 1:3016654/41‑1 ATGCAAGCACCATCATTTACTAAAACAAGTAAATAAA > 1:2612488/1‑37 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGAT < 1:1129332/71‑1 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:3100119/70‑1 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGAT < 1:424124/44‑1 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA > 1:3374239/1‑41 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA < 1:3443631/39‑1 CAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAG > 1:3170254/1‑56 CAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA < 1:1924198/39‑1 GCACCATCATTTACTAAAACAAGTAAATAAACGAGA < 1:2355494/36‑1 CACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGC > 1:529326/1‑70 CATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG < 1:1647839/60‑1 CATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA < 1:1885790/59‑1 CATCATTTACTAAAACAAGTAAATAAACGAGAGATG < 1:286289/36‑1 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC < 1:116215/69‑1 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:179989/51‑1 TCATTTAATAAAACAAGTAATTAAACGAGAGATGACCTTTGCAAAAGGCAAAATT < 1:2898197/55‑1 CATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG > 1:1007032/1‑57 CATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG > 1:2430107/1‑57 CATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA < 1:2984724/56‑1 CATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAA > 1:2227149/1‑45 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA < 1:2880798/70‑1 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA < 1:2059978/70‑1 TTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:2335514/1‑68 TTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAA < 1:690887/42‑1 TACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAG < 1:3333273/70‑1 TACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:406311/1‑67 TAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA > 1:1595450/1‑71 TAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA < 1:714210/49‑1 TAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:2933183/37‑1 AAACAAGTAAATAAACGAGAGATGACCTTTTCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > 1:3007673/1‑71 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > 1:1598492/1‑71 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > 1:2336516/1‑71 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > 1:3643676/1‑71 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > 1:2964101/1‑71 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA > 1:1130165/1‑49 TCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3750522‑3750592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > W3110S.gb/3751792‑3751861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |