| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 7063 | 38 (0.990) | 19 (0.540) +GATT |
6/90 | NT | 50.2% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | W3110S.gb | = 2564144 | 3 (0.080) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
ACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGA > W3110S.gb/6994‑7131 | aCCCGCCAGTAATATCAGCATGGAGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCt > 1:2639191/1‑71 (MQ=255) gCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGa > 1:2110002/1‑70 (MQ=255) aGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAAt > 1:3230437/1‑71 (MQ=255) aaTATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATcc < 1:3432199/70‑1 (MQ=255) atatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAatcatc > 1:1864192/1‑59 (MQ=255) atatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATccc < 1:1574335/70‑1 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgc < 1:1049856/71‑1 (MQ=255) cgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGa > 1:3680349/1‑71 (MQ=255) gcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa < 1:1816932/53‑1 (MQ=255) ttGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGc > 1:2554378/1‑71 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg > 1:1015756/1‑70 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg < 1:3371908/66‑1 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAg < 1:760267/69‑1 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc < 1:1436749/71‑1 (MQ=255) aCAGATGACCTGGGTGTCGATAAAAATGCCAATCGTCTGGACAATCCCTTGCGCTGCCGGATGCGGAg < 1:3176435/68‑1 (MQ=255) cAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGc > 1:1598551/1‑56 (MQ=255) aGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg < 1:3646534/71‑1 (MQ=255) aTGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:1406123/1‑40 (MQ=255) aTGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:1901560/1‑40 (MQ=255) aCCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAcgc > 1:2209906/1‑71 (MQ=255) gggTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGcc < 1:1052757/47‑1 (MQ=255) gggTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGa > 1:1039679/1‑56 (MQ=255) tCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg < 1:2218369/49‑1 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTgcgc > 1:3605685/1‑36 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGa > 1:2341224/1‑49 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg < 1:3100627/55‑1 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgct < 1:847313/70‑1 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGccgctgccgctg > 1:847730/1‑71 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaat > 1:2166519‑M1/3‑18 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa < 1:2120508‑M1/68‑53 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatgaaac < 1:3683289‑M1/46‑31 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatga < 1:3146491‑M1/43‑28 (MQ=255) aTAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGcc < 1:2794362/52‑1 (MQ=255) tataaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCcgctgccgctgc > 1:1320192/4‑70 (MQ=255) tAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgc > 1:3683834/1‑67 (MQ=255) gaaaaatGCCAATCATCgattcttcctgagggaacgact < 1:2565201‑M1/38‑23 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg > 1:2366684‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:701656‑M1/70‑55 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg > 1:484273‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:1417504‑M1/70‑55 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:3084949‑M1/70‑55 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:2474785‑M1/70‑55 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg > 1:2687271‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa > 1:2798925‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa > 1:2794623‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaa > 1:2447452‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGa > 1:2901052/1‑40 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCa > 1:1274497/1‑51 (MQ=255) aaaaaTG‑CAATCATCTGGACAATCCCTTGCGCTGCCGGa > 1:1624812/1‑39 (MQ=39) aaaaTGCCAATCATCgattcttcctgagggaacgactta > 1:3058025‑M1/1‑15 (MQ=255) aaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgt < 1:2976078‑M1/69‑56 (MQ=255) aTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGtt > 1:1303844/1‑71 (MQ=255) tGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg < 1:2299908/39‑1 (MQ=255) tGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGa > 1:2779089/1‑41 (MQ=255) ccAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTTCCGCGTTTgg < 1:810550/71‑1 (MQ=255) ccAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTg < 1:506439/70‑1 (MQ=255) cAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGc > 1:2273218/1‑71 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagttt < 1:2449917‑M1/71‑66 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtt > 1:2110032‑M1/1‑6 (MQ=255) atcatcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGt < 1:711606/71‑1 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagttt > 1:3563691‑M1/1‑5 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagttt > 1:3568086‑M1/1‑5 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtt < 1:789419‑M1/69‑65 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaacta < 1:1385626‑M1/37‑33 (MQ=255) catcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagttt > 1:1079127‑M1/1‑4 (MQ=255) catcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAcgccgc > 1:2999687/1‑48 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:40519‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:1604782‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaaga > 1:1465147‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaaga > 1:3223093‑M1/1‑3 (MQ=255) tcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggc < 1:2471278‑M1/52‑51 (MQ=255) tcgattcttcctgagggaacgacttatgaaactaaagacca < 1:557562‑M1/41‑40 (MQ=255) | ACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGA > W3110S.gb/6994‑7131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |