| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2691202 = | 32 (0.830) | 7 (0.220) +GTCAGTTC |
4/82 | NT | 16.9% | coding (2998/3888 nt) | purL | phosphoribosylformyl‑glycineamide synthetase |
| ? | W3110S.gb | 2980369 = | 50 (1.300) | coding (470/1419 nt) | araE | arabinose transporter | |||||
CAGTTTTACATTCAGGCCCGGATCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCCCACCAGACACGCAACGTGGTGCGGCT > W3110S.gb/2691137‑2691271 | cAGTTTTACATTCAGGCCCGGATCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGt < 1:985711/71‑1 (MQ=255)cAGTTTTACATTCAGGCCCGGATCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGt > 1:2430670/1‑71 (MQ=255)cAGTTTTACATTCAGGCCCGGATCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGt > 1:2181434/1‑71 (MQ=255) ttttACATTCAGGCCCGGATCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGt < 1:1307667/71‑1 (MQ=255) ttttACATTCAGGCCCGGATCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGt < 1:1318947/71‑1 (MQ=255) ttACATTCAGGCCCGGATCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGtt < 1:883408/67‑1 (MQ=255) cATTCAGGCCCGGATCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGc < 1:2027107/71‑1 (MQ=255) ttCAGGCCCGGATCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCa < 1:3694045/70‑1 (MQ=255) aTCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCAt < 1:1943325/69‑1 (MQ=255) tCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTg < 1:820857/71‑1 (MQ=255) gCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCa < 1:496694/71‑1 (MQ=255) tcgtTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCt < 1:788338/58‑1 (MQ=255) tcgtTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGt < 1:2256434/71‑1 (MQ=255) cgtTAGATTTCGCCTGATGCTCCTGATCGGCACACTc > 1:91265/1‑37 (MQ=255) cgtTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAgg > 1:3288240/1‑69 (MQ=255) gtTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCa > 1:2165685/1‑50 (MQ=255) gtTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTa < 1:2359401/70‑1 (MQ=255) gtTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAg > 1:72592/1‑71 (MQ=255) aGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCa > 1:3507429/1‑47 (MQ=255) aGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGgcg < 1:1518671/51‑1 (MQ=255) aGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGttt > 1:715005/1‑71 (MQ=255) tttCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACg < 1:206768/42‑1 (MQ=255) ttCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAgg > 1:3593072/1‑45 (MQ=255) ttCGCCTGATGCTCCTGATCGGCACACTCCAGGTTGTCACGCAgg > 1:1440535/1‑45 (MQ=255) tCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCa > 1:669562/1‑42 (MQ=255) cGCCTGATGCTCCTGATCGGCACACTCCGGGTTGt < 1:3562457/35‑1 (MQ=255) gCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCcca > 1:1044266/1‑71 (MQ=255) taccagttgatggtgaactgacCCGGGTTGTCACGc > 1:1601233‑M1/23‑36 (MQ=255) taccagttgatggtgaactgacCCGGGTTGTCACGCAg > 1:2434073‑M1/23‑38 (MQ=255) gATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCccac > 1:2627607/1‑68 (MQ=255) ccagttgatggtgaactgacCCGGGTTGTCACGCa < 1:3570305‑M1/15‑1 (MQ=255) ccagttgatggtgaactgacCCGGGTTGTCACGCa < 1:1737857‑M1/15‑1 (MQ=255) ccagttgatggtgaactgacCCGGGTTGTCACGCAgg > 1:1472029‑M1/21‑37 (MQ=255) ccagttgatggtgaactgacCCGGGTTGTCACGCAg < 1:310756‑M1/16‑1 (MQ=255) tGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCCCACCAGac < 1:3617152/71‑1 (MQ=255) cagttgatggtgaactgacCCGGGTTGTCACGCAgg > 1:2090330‑M1/20‑36 (MQ=255) gCTCCTGATCGGCACACTCCGGGTTGTCACGCATGCGCTGCATCTGCCAGGTAGTTTCTGCCCACCAGaca > 1:2518186/1‑71 (MQ=255) cTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCCCACCAGACACGc < 1:2578117/70‑1 (MQ=255) cTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCCCACCAGACACGCa < 1:117974/71‑1 (MQ=255) gATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCCCACCAg > 1:2530609/1‑62 (MQ=255) acacTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCCCACCAGACACGCAACGTGGTGc < 1:3417579/71‑1 (MQ=255) acacTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCCCACCAGACACGCAACGTGGTGc > 1:2326711/1‑71 (MQ=255) cacTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGtt < 1:1136545/42‑1 (MQ=255) tCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCCCACCAGACACGCAACGTGGTGCGGCt > 1:3037397/1‑71 (MQ=255) | CAGTTTTACATTCAGGCCCGGATCGGCGTCGTTAGATTTCGCCTGATGCTCCTGATCGGCACACTCCGGGTTGTCACGCAGGCGCTGCATCTGCCAGGTAGTTTCTGCCCACCAGACACGCAACGTGGTGCGGCT > W3110S.gb/2691137‑2691271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |