| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2107291 | 41 (1.070) | 138 (3.670) +A |
25/96 | NT | 76.4% | coding (904/993 nt) | wbbI | conserved hypothetical protein |
| ? | W3110S.gb | = 2809956 | 46 (1.200) | coding (531/531 nt) | mprA | DNA‑binding transcriptional regulator | |||||
Only 100 of 287 total aligned reads displayed.
TCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGC > W3110S.gb/2809886‑2810026 | tCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:1183196/1‑71 (MQ=255)tCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:2912188/1‑71 (MQ=255) cACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:834562/1‑70 (MQ=255) aCCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:2392056/1‑69 (MQ=255) aCCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt < 1:589924‑M2/70‑2 (MQ=255) aCCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:270213‑M2/1‑69 (MQ=255) aCCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:2725417‑M2/1‑69 (MQ=255) cccGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:1222157‑M2/1‑68 (MQ=255) ccGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaat > 1:523271‑M2/1‑67 (MQ=255) ccGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAcgcg < 1:2655139/71‑1 (MQ=255) cGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaata < 1:2431179‑M2/71‑6 (MQ=255) gCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatac > 1:103469‑M2/1‑65 (MQ=255) gCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaata < 1:1279744‑M2/70‑6 (MQ=255) gCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa < 1:2128826‑M2/68‑4 (MQ=255) cAAATTGCTCTCCCGTCTCGCCCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatac < 1:2081431‑M2/70‑7 (MQ=255) cAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatac < 1:3684089‑M2/70‑7 (MQ=255) aTTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaa > 1:2955336‑M2/1‑61 (MQ=255) aTTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCAtct < 1:1657324/71‑1 (MQ=255) ttGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa > 1:2613366‑M2/1‑60 (MQ=255) ttGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa > 1:768507‑M2/1‑60 (MQ=255) tGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa < 1:1510142‑M2/70‑12 (MQ=255) tGCTCTCC‑GTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat < 1:972408‑M2/70‑13 (MQ=255) gCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat < 1:2877792‑M2/70‑13 (MQ=255) gCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:187352‑M2/1‑58 (MQ=255) gCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat < 1:2294583‑M2/70‑13 (MQ=255) gCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:3508840‑M2/1‑58 (MQ=255) ctctCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatta > 1:403240‑M2/1‑57 (MQ=255) ctctCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:2570563‑M2/1‑57 (MQ=255) ctctCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:1138190‑M2/1‑57 (MQ=255) tctcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa < 1:433422/56‑1 (MQ=255) tctcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa < 1:3650350/56‑1 (MQ=255) ctcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:2521929‑M2/1‑55 (MQ=255) ctcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa < 1:3408832‑M2/58‑4 (MQ=255) tcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa < 1:2178377/54‑1 (MQ=255) tcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattag > 1:1071537‑M2/1‑54 (MQ=255) tcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattag > 1:3353544‑M2/1‑54 (MQ=255) tcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattag < 1:1302682‑M2/69‑16 (MQ=255) tcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattag < 1:192613‑M2/69‑16 (MQ=255) tcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCa > 1:783069/1‑70 (MQ=255) ccGTCTCGACCAGATGGCACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattagga < 1:1783052‑M2/69‑18 (MQ=255) ccGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattagg > 1:2713826‑M2/1‑52 (MQ=255) ccGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatta < 1:1903919‑M2/66‑15 (MQ=255) ccGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:144805‑M2/1‑52 (MQ=255) gTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCaaaaa > 1:2028268/1‑70 (MQ=255) tctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa < 1:667323/49‑1 (MQ=255) tctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:1568073‑M2/1‑49 (MQ=255) tctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:1466677‑M2/1‑49 (MQ=255) tctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaa > 1:1340471‑M2/1‑49 (MQ=255) ctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa < 1:1734520‑M2/59‑12 (MQ=255) ctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAta < 1:1201537‑M2/50‑3 (MQ=255) tcTACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:1415877‑M2/1‑47 (MQ=255) tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatta < 1:1731262‑M2/61‑15 (MQ=255) tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa < 1:3418859‑M2/58‑12 (MQ=255) tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa < 1:2370190‑M2/58‑12 (MQ=255) tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatac < 1:2398746‑M2/53‑7 (MQ=255) tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa < 1:1644423‑M2/50‑4 (MQ=255) tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa < 1:3175018‑M2/50‑4 (MQ=255) ccAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa < 1:2836198‑M2/54‑12 (MQ=255) aGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa > 1:2191329‑M2/1‑41 (MQ=255) gATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa < 1:3109868‑M2/51‑12 (MQ=255) gATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:175848‑M2/1‑40 (MQ=255) gATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTtat < 1:49384/71‑1 (MQ=255) aTGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattagg > 1:895320‑M2/1‑39 (MQ=255) aTGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:2228579‑M2/1‑39 (MQ=255) aTGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaat > 1:813918‑M2/1‑39 (MQ=255) tGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATaa < 1:3544064/71‑1 (MQ=255) tGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATaa < 1:2211331/71‑1 (MQ=255) tGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATaa < 1:1117921/71‑1 (MQ=255) tGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATaa < 1:337011/71‑1 (MQ=255) tGGAACAAGACGGTGTGGTTCTCGAAGAGATGAGATAAtaataa < 1:3460698‑M2/44‑7 (MQ=255) ggAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattag < 1:2752029‑M2/52‑16 (MQ=255) ggAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:1250729‑M2/1‑37 (MQ=255) ggAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATaa > 1:1488762/1‑70 (MQ=255) aaCAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:1709416/1‑35 (MQ=255) aaCAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatta < 1:343786‑M2/49‑15 (MQ=255) aaCAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:453420‑M2/1‑35 (MQ=255) aCAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:3236846‑M2/1‑34 (MQ=255) aCAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa < 1:3043013‑M2/37‑4 (MQ=255) cAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaa > 1:1324585‑M2/1‑33 (MQ=255) aaGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:2684665‑M2/1‑32 (MQ=255) aaGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa < 1:2620269‑M2/35‑4 (MQ=255) gACGGTGTGGTTCTCGAAGCCATGAGCTAAtaata < 1:1768918‑M2/35‑6 (MQ=255) aCGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattag < 1:3480468‑M2/44‑16 (MQ=255) cGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:2478514‑M2/1‑28 (MQ=255) cGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATaa > 1:720181/1‑61 (MQ=255) ggTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGa < 1:628537/53‑1 (MQ=255) gtgtGGTTCTCGAAGCGATGAGCTAAtaatacaaa > 1:442555‑M2/1‑26 (MQ=255) tgtgGTTCTCGAAGCGATGAGCTAAtaatacaaaa > 1:3030989‑M2/1‑25 (MQ=255) tgGTTCTCGAAGCGATGAGCTAAtaatacaaaaattag > 1:1542509‑M2/1‑23 (MQ=255) gTTCTCGAAGCGATGAGCTAAtaatacaaaaatta > 1:3291271‑M2/1‑21 (MQ=255) gTTCTCGAAGCCATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTtata > 1:1956346/1‑53 (MQ=255) ctcGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAg > 1:3600382/1‑71 (MQ=255) cGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATaa > 1:3338997/1‑49 (MQ=255) gAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGaaaaaa > 1:1404219/1‑57 (MQ=255) gATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCaa > 1:2944284/1‑71 (MQ=255) tGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCa < 1:374138/68‑1 (MQ=255) aGCTAACGCGTCATCTCGCTCAAAAATCCAGATTAATAAAAGAAAAAATGa > 1:1829621/1‑51 (MQ=255) gCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGaaaaaa > 1:2791805/1‑47 (MQ=255) cTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCt > 1:2827796/1‑71 (MQ=255) cTAACGCGTCATCTCGCTCAAAAATCCAGATTTAAAAAAGAAAAAATGACTGGCCAGCATCGc < 1:2800347/63‑1 (MQ=255) | TCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGC > W3110S.gb/2809886‑2810026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |